KEGG   Owariibacterium komagatae: Ruko_32020
Entry
Ruko_32020        CDS       T10753                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
oko  Owariibacterium komagatae
Brite
KEGG Orthology (KO) [BR:oko00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:oko02048]
    Ruko_32020
Enzymes [BR:oko01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Ruko_32020
Prokaryotic defense system [BR:oko02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Ruko_32020
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like HSDR_N ResIII T1RH-like_C
Other DBs
NCBI-ProteinID: BFJ86785
UniProt: A0ACD8FY35
LinkDB
Position
3240887..3243979
AA seq 1030 aa
MSIGQREKATQKRVIKLFVQELGYTYLGDFTERKNANIETELLTKFLTRKGYSPVLINRA
LKELQDAAGDQSVNLYDLNEQTYKKLRYGVKVSESVGQHKITVHFVDWENPLENDFYIAE
EVTIKHKRPDLVLYINGIAFAVIELKRSTISMSEGIRQNLTNQRPDMIMQFFATVGLVLA
GNDSEGARYGTTGTPEKYYLSWKEDSNAKDEVSVAVRAQIGKYPLRLDKNLISLCRKERL
VELLHNFIVFDSGVKKTCRPNQFFGNMAARDFIRRHEGGIIWHTQGSGKSLTMVWLSKWI
KENISDSRILIITDRDELDVQIEQVFAGVNESIVRIRRGSELIQKINDTSPVMMCSLIHK
FGKKNRGKSGETDYAGFIEELKRSLPENFSPKGDFYVFVDECHRTQSGKLHKAMETILPN
ATFIGFTGTPLMKKDKETSLEVFGPYIHRYKFDEAVRDKVVLDLRYEAREVEQNVVQQDR
IDAWFEAKTRGLTGVAKAKLKQRWGNLQKMFSSKARLGQIVADIVFDMETKPRLHDGRGN
AMLVAGSIYQACKFYELFQETELKGKCAIVTSYEPAVGDIRTETVGDDGETEAVEQYEIY
MKMLGGKDPKAFEKEVKEKFIKQPEQMKLLIVVDKLLTGFDAPPATYLYIDKSMRDHGLF
QAICRVNRLDGEDKEFGYIIDYKDLFRSLENAVADYTSEAFDCYDKEDVSGLLTDRLDKA
KEQLEDSLEALRALCEPVAPPKDMVDYYHYFCGVNTESFDLDELEENMPKREQLYNLSAT
ALRAFGEVSGELQEKYHYTVEQIKALEREVTYYIKVRDDVRLASGDYVDLKKYDPDMRHL
IDTYLSADPSRVLTSFGGATLVELLVDNGISALKDMPASTPKEQEAVAETIENNIGKEIV
ERIQSNPKYYEKMSALLRELIEKRKNDVINYEEYLRQIVELARKVHKPESGTEYPSGIRE
SAAKRAFYDHLNGDTVVANQIYNAVMSSKQDNFRGSKIKERKIWRAIRAVVKDDQEADQL
LALVKEQSEF
NT seq 3093 nt   +upstreamnt  +downstreamnt
atgagtattggccaacgggaaaaagccacgcagaagcgtgtcataaaactatttgtccag
gaacttgggtacacctatctgggcgatttcaccgagcgaaaaaacgccaatattgaaacc
gaactgctgacgaaatttctgacccgcaagggctattcgccggtacttatcaaccgcgcc
ttgaaggagctgcaagatgccgccggagatcagtcagtgaacctctatgatttgaacgag
cagacttataaaaagctgcgctatggggtcaaggtcagcgagtctgtcggccagcataag
attaccgtccattttgtggattgggaaaatccgctggaaaatgacttttacatcgccgag
gaagtaactatcaagcataaacgtccggatcttgtgctgtacatcaacggtatcgctttt
gctgtcatagagctgaagcgcagcaccatttccatgtcggagggtatccgccagaacctg
accaaccagcgcccggatatgattatgcagttttttgccaccgttgggcttgtcttggca
ggcaatgattcggaaggggcacgttacggcactactggcactccggaaaagtattatctt
tcttggaaagaagattccaatgccaaagatgaggtttccgtagcggtacgcgctcaaatc
ggaaaatatcccctgcgtctggacaaaaacctgatttctctgtgccggaaagagcggctt
gtagagttgctgcacaattttatcgtatttgacagcggagtgaaaaagacctgtcggcct
aatcagttcttcggaaatatggcagcgcgggattttataaggcggcatgagggcggcatc
atctggcatacccaaggctccggaaaatccttgaccatggtgtggctcagcaagtggatt
aaggaaaatatttctgacagccgtatcctgattatcaccgaccgggacgagctggatgtg
cagatcgagcaggtgtttgccggggtcaatgagagcattgtccgtattcgccggggaagc
gaattgattcagaagatcaacgacacctcgcctgtcatgatgtgctccctgatccacaag
tttggcaagaaaaacagaggcaagagcggcgagaccgactatgctggatttattgaagag
ctgaaacgctcactgccggaaaacttttctcccaaaggcgatttctatgtctttgtggat
gaatgccaccgtacccaatccggcaaactccacaaagcgatggaaaccattttgccgaat
gccacctttatcggcttcaccggtactccattgatgaaaaaggataaggagaccagtctg
gaggtatttggcccttacatccatcgctacaagtttgatgaagcagtgcgggataaagtg
gttttggatctgcgctatgaagctcgtgaagtagagcagaatgttgtccagcaggatcgg
atcgacgcttggtttgaggcaaaaacgcgcgggctgaccggtgtggcaaaagctaagctg
aaacagcgatggggcaatctacaaaagatgtttagctccaaagcccggttgggacagatt
gtagcggatattgtttttgatatggagacaaaaccgcgcctgcatgatggacggggtaat
gccatgctggtggctggcagtatctatcaggcgtgcaaattctatgaattgttccaggag
accgagctgaagggcaagtgcgccatcgtgacttcttacgaaccagcggtgggtgatatt
cgcactgaaaccgtaggtgatgatggtgagaccgaggctgtggagcaatatgagatctac
atgaagatgctgggtgggaaagacccgaaggcatttgaaaaagaggtcaaggaaaagttt
atcaagcagccggaacagatgaaactgctgatcgtggtggataagttgctgacaggcttt
gatgctccgcctgccacttacctgtatattgataagtccatgcgagaccatggcttgttc
caggcaatctgccgcgtcaatcgtttggatggtgaagataaggaatttgggtatattatt
gactacaaagacctgtttcgatccttggaaaatgcggttgcagactatacctccgaagca
tttgactgctacgataaggaagatgtctccggcctgctgacagatcgtttggacaaggcc
aaggaacagctggaggattctctggaagctctgcgcgcactgtgcgagcctgtggcaccg
cctaaagatatggtagactactaccattatttctgcggtgtcaacaccgaatcttttgac
ttggatgaattggaagaaaatatgcccaagcgggaacagctttacaatctgtcagcgaca
gctcttcgcgcttttggtgaagtatcgggtgaattgcaagaaaagtaccactataccgtg
gaacagatcaaggcgctggagagagaagttacctactacatcaaggtgcgtgacgatgtg
cgtctggctagtggtgactatgtggatttgaagaaatatgatccggacatgcgccattta
atcgatacttatttgtcggctgatcccagtcgtgtgttgacctcctttggaggagcaaca
ctggtggagctgttggtagacaacggaatttctgcgctgaaggatatgcctgcctctaca
cccaaagagcaggaagcagttgcagagactattgaaaacaatattggcaaggaaattgtt
gaaagaatccaaagtaaccccaaatactatgagaagatgtctgcgcttcttcgagaattg
attgaaaagcgcaaaaatgacgtgatcaactatgaggagtatttgcgtcagattgtggaa
ctggcaagaaaggtacataagccggaaagcggcacagaatatccttcgggaatccgggag
agtgccgccaagcgagccttttatgaccatcttaacggggatacggttgtggccaatcag
atatataacgctgtcatgtccagcaaacaggacaatttccggggaagcaaaatcaaagag
cgtaaaatctggcgtgctattcgtgctgtcgtaaaagatgaccaggaagccgatcagttg
cttgcattggtaaaggagcagagtgaattttag

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