Owariibacterium komagatae: Ruko_33700
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Entry
Ruko_33700 CDS
T10753
Name
(GenBank) hypothetical protein
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
oko Owariibacterium komagatae
Pathway
oko03410
Base excision repair
oko03430
Mismatch repair
oko03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oko00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ruko_33700
03430 Mismatch repair
Ruko_33700
03440 Homologous recombination
Ruko_33700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oko03400
]
Ruko_33700
DNA repair and recombination proteins [BR:
oko03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ruko_33700
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ruko_33700
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ruko_33700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
BFJ86953
LinkDB
All DBs
Position
3426654..3428684
Genome browser
AA seq
676 aa
AA seq
DB search
MIYHPWRVSRPDAQTAARLSAAVGQPLLVGKVLAARGVCDSQEAVRRCGDGQLLSDPFLL
AGMEQAVDRIHRAIDDGERIVVFGDYDVDGVTATALLYTYLDAAGAEVYYKLPSRDEDGY
GLSANAVEQMAEKEVGLVITVDNGISANEAIALAVEKGMDVVVTDHHLPPAVLPQAAALV
DPQLPFDKSPCKSLSGAGVAFKLVCALDAADPAEMLPYYGDLAAIGTVADIMNLEGENRT
IVKAGLSLLQNTDRPGLAALISQCGLEGKELTAENVSFGLAPRLNAAGRMDSATVALRLL
LSDDEEEATLLAQELDDKNAARQKAEQEISQIVLEQLTADPTYQSDRILVAWGDGFHPGV
IGIVASRIAERMGKPAIIISVDENGEGKGSGRSQEGISLYEAIASCEQLLIRFGGHASAA
GLSIRRENLPAFRKAINLWAAAHHPVVDVPAIVADALVALNEISEQEVAALSVLAPFGNG
NPAPLFLVENALVDAVYPVSEGKHCRVRLRQNGSILNAVFFGKGPDALGYVPGDTVDVLV
ALSIFEGRNGVMVSARIKDLRPAGMGEEHAQLAQWADAFCSGAALEEAQRRAITPVRADT
AGVYRFLAAHPQGLSESDLRPLFAKFGAGSAGKVIISLKALEQLSLIENKNGCWRLLPVK
EKKDLFSAPVLQKLEE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcatccctggcgggtaagccgtcccgatgcacagactgcggcccggctgagt
gcggctgtgggacagccgcttttggtgggaaaggtgctggcagcgcgtggtgtgtgtgat
tcgcaggaggcggttcgcagatgtggagatggtcagctcctcagcgatccttttttgctg
gcgggtatggaacaggctgtggacagaatccacagagccatcgatgacggcgagagaatc
gttgtgtttggagactatgatgtggacggtgtgacggccacagccttgctgtatacgtat
ctggacgctgcgggagcagaagtgtattacaaactgcccagccgtgatgaagacggctac
ggcctttctgccaacgcagtagagcagatggcagagaaagaggtcggactggtcatcacg
gtggacaatggaatctccgccaacgaagccattgcactggcagtggaaaaaggcatggat
gtcgtggtgacggaccatcacctgccgccggccgttcttccgcaggcagcagcgctggtc
gatccgcagctaccttttgacaaaagtccctgcaaaagtctttccggcgcgggcgtggct
tttaagctggtgtgcgcgctggatgcggccgacccggcggagatgctgccttattatggc
gatttggcagccatcggcacggtggcggacatcatgaatctggaaggagaaaacagaacc
attgtcaaagcgggtttgtctcttcttcagaacacagaccgcccggggctggctgccctg
atctctcagtgcgggctggaaggcaaggagcttaccgcagaaaatgtgtccttcggcctg
gcaccgcgtttgaatgcggcaggtcggatggactctgccacagtggcgctccggttgctg
ctcagcgatgacgaggaagaagcaacgcttttggcacaggaactggatgataaaaatgct
gcccggcagaaggcggagcaggaaatttcacagattgtactggagcagctgaccgcagat
cctacgtatcagtcggatcggattctggtggcctggggcgacggattccacccgggtgtg
attggaattgtagcttcgcgcattgcggaacgtatgggaaagcctgcgattatcatttct
gtggacgagaacggagagggaaaaggttccgggcgttcccaggaaggtatttcactttat
gaggccatcgcttcctgcgagcaattgttgattcggtttggcgggcacgcctcggcggcc
ggcctctcgattcgtcgggaaaatttgcccgcatttcggaaagccatcaatctttgggct
gccgcgcaccatccggtggtcgatgtgccggcaattgtggcggatgcgctggtcgcgctg
aacgagatttctgagcaggaggtcgctgcactgagtgtgctggcgccttttggaaacggc
aaccctgccccgctgtttttagtggaaaatgctttggtggatgcggtttaccctgtcagc
gagggaaagcattgccgcgttcggcttcggcagaacggcagtattttgaatgcggtattc
ttcgggaaggggccggatgcgctgggatatgtgcccggagataccgtggatgtattggtg
gcactttccatttttgaggggagaaacggtgtcatggtttccgcccgcatcaaggatctg
cggcctgcgggaatgggcgaagagcatgcgcagctggcccagtgggcagacgcattttgc
agcggcgccgcgctggaagaagcacagcgccgggcgattacccctgttcgtgcggacacg
gccggcgtttatcggttcctggcggcgcatccgcagggcctttcggagagcgatttgcgc
ccgttgtttgcaaaattcggggcgggaagcgctgggaaagtaatcatttcgcttaaagct
ctggagcagctgtctttgatcgagaacaaaaacggatgctggcggctgcttccggtgaaa
gagaaaaaagatcttttcagtgcgcctgtgttacaaaagttagaggagtga
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