KEGG   Oryzias latipes (Japanese medaka): 100049222
Entry
100049222         CDS       T02443                                 
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100049222 (tbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    100049222 (tbp)
   03021 Transcription machinery [BR:ola03021]
    100049222 (tbp)
Transcription factors [BR:ola03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    100049222 (tbp)
Transcription machinery [BR:ola03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     100049222 (tbp)
  RNA polymerase III system
    TFIIIB
     100049222 (tbp)
  RNA polymerase I system
    SL1/TIF-1B
     100049222 (tbp)
SSDB
Motif
Pfam: TBP
Other DBs
NCBI-GeneID: 100049222
NCBI-ProteinID: NP_001265784
UniProt: C0SQJ2
LinkDB
Position
3:complement(24479421..24484726)
AA seq 305 aa
MDQNNSIQAFQGLASPPGVMTPTMPVFSPMMPYGSGLTPQPVQNTNSLSILEEQQRQQRQ
QQQQQQTQQLNTGLPGASGQTPQLFHSQPVPGSTTTALPGNTPLYSAPVTPMTPIAPATP
ASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF
SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDLKIQNMVGSCDVKFPIRLEGLV
LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG
FRKTT
NT seq 918 nt   +upstreamnt  +downstreamnt
atggaccaaaacaacagcatccaagcctttcaaggcctggcttcacctccgggtgtgatg
accccaaccatgccagtgttcagtcccatgatgccgtacggctcgggcctcacgccccag
ccagtacaaaacacaaacagtttgtccatactggaggagcagcagaggcaacagcgacaa
caacagcagcagcaacaaacacagcagttgaacacaggtcttccaggagcatcaggacag
actccacagctctttcattctcagccagtaccaggttcaactaccactgcgctaccgggg
aacaccccgctctacagcgctccggtgacgcctatgacccccatcgctccagcaacacct
gcctcagagagctctggcatcgtaccacagctacaaaacatagtttctactgtaaatctg
ggttgtaaattggacctgaagactattgccttaagagccaggaatgctgaatacaaccca
aagcgttttgctgcagtcattatgagaatacgagaaccaagaactacagctctcatcttc
agctctgggaagatggtctgcactggagccaaaagtgaggaacagtccaggttagcagct
agaaaatatgcccgtgtggtgcaaaagctcggttttcctgcaaagtttttggacctcaag
attcaaaacatggtgggcagttgtgatgtcaagtttcccattcgtctggaaggactggtc
ctcacacatcagcagttcagcagctatgagccggagctttttccaggcctgatttacaga
atgatcaaacctagaattgtgctgcttatctttgtttctgggaaggtggtactcacaggt
gccaaggtgagagcagaaatctatgaagcttttgaaaacatttatcccatcctgaaagga
ttccgcaagactacgtag

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