Oryzias latipes (Japanese medaka): 100049222
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Entry
100049222 CDS
T02443
Symbol
tbp
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100049222 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100049222 (tbp)
03021 Transcription machinery [BR:
ola03021
]
100049222 (tbp)
Transcription factors [BR:
ola03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
100049222 (tbp)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
100049222 (tbp)
RNA polymerase III system
TFIIIB
100049222 (tbp)
RNA polymerase I system
SL1/TIF-1B
100049222 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
100049222
NCBI-ProteinID:
NP_001265784
UniProt:
C0SQJ2
LinkDB
All DBs
Position
3:complement(24479421..24484726)
Genome browser
AA seq
305 aa
AA seq
DB search
MDQNNSIQAFQGLASPPGVMTPTMPVFSPMMPYGSGLTPQPVQNTNSLSILEEQQRQQRQ
QQQQQQTQQLNTGLPGASGQTPQLFHSQPVPGSTTTALPGNTPLYSAPVTPMTPIAPATP
ASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIREPRTTALIF
SSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDLKIQNMVGSCDVKFPIRLEGLV
LTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAFENIYPILKG
FRKTT
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaacaacagcatccaagcctttcaaggcctggcttcacctccgggtgtgatg
accccaaccatgccagtgttcagtcccatgatgccgtacggctcgggcctcacgccccag
ccagtacaaaacacaaacagtttgtccatactggaggagcagcagaggcaacagcgacaa
caacagcagcagcaacaaacacagcagttgaacacaggtcttccaggagcatcaggacag
actccacagctctttcattctcagccagtaccaggttcaactaccactgcgctaccgggg
aacaccccgctctacagcgctccggtgacgcctatgacccccatcgctccagcaacacct
gcctcagagagctctggcatcgtaccacagctacaaaacatagtttctactgtaaatctg
ggttgtaaattggacctgaagactattgccttaagagccaggaatgctgaatacaaccca
aagcgttttgctgcagtcattatgagaatacgagaaccaagaactacagctctcatcttc
agctctgggaagatggtctgcactggagccaaaagtgaggaacagtccaggttagcagct
agaaaatatgcccgtgtggtgcaaaagctcggttttcctgcaaagtttttggacctcaag
attcaaaacatggtgggcagttgtgatgtcaagtttcccattcgtctggaaggactggtc
ctcacacatcagcagttcagcagctatgagccggagctttttccaggcctgatttacaga
atgatcaaacctagaattgtgctgcttatctttgtttctgggaaggtggtactcacaggt
gccaaggtgagagcagaaatctatgaagcttttgaaaacatttatcccatcctgaaagga
ttccgcaagactacgtag
DBGET
integrated database retrieval system