Oryzias latipes (Japanese medaka): 100049229
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Entry
100049229 CDS
T02443
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03013
Nucleocytoplasmic transport
ola03015
mRNA surveillance pathway
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100049229 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
100049229 (rbm8a)
03015 mRNA surveillance pathway
100049229 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
100049229 (rbm8a)
03041 Spliceosome [BR:
ola03041
]
100049229 (rbm8a)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100049229 (rbm8a)
Spliceosome [BR:
ola03041
]
Complex C
Other components
EJC/TREX
100049229 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
100049229
NCBI-ProteinID:
NP_001098149
UniProt:
Q8JJC6
LinkDB
All DBs
Position
16:29128010..29133093
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AA seq
173 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDESIHKLKEKAKKRKGRGFGADDGARSRAKEDYDTVEQDGD
EPGPQRSVEGWILFVTGVHEEATEEDIHDKFSEFGEIKNLHLNLDRRTGYLKGYALVEYE
TYKEAQAAMEGLNAQDLMGQPVSVDWAFVRGPPKNKRRTGGRRRSRSPDRRRR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtgttggaccttcatgaggcgggaggagaagactttcctatggatgaggat
gaaagcatccacaagttaaaggagaaagccaagaagaggaaaggacgaggttttggtgca
gatgatggggcccggtccagagccaaagaggactatgatactgtggaacaggacggagat
gagcctgggcctcagagatctgtagaaggctggatcctgtttgtgacgggcgtgcacgag
gaggccacagaggaagacatccacgataagttctcagagtttggggaaatcaagaacctc
catcttaatctggatcgcagaactggctatctgaagggctacgcactggtggagtatgag
acgtacaaagaggcccaggcggccatggaggggctcaacgctcaggatctgatgggccag
cctgtcagtgtagactgggcatttgtcagggggcccccaaagaacaagagaaggaccggt
gggcggagacgcagcagaagtcccgacaggaggcggcgttaa
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