Oryzias latipes (Japanese medaka): 100049258
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Entry
100049258 CDS
T02443
Symbol
kfh-r
Name
(RefSeq) red-sensitive opsin
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ola04030
]
100049258 (kfh-r)
G protein-coupled receptors [BR:
ola04030
]
Rhodopsin family
Vision
Opsin
100049258 (kfh-r)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srv
MpPF26
Cytochrom_B_N_2
7TM_GPCR_Srsx
7tm_4
Motif
Other DBs
NCBI-GeneID:
100049258
NCBI-ProteinID:
NP_001098164
UniProt:
P87367
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All DBs
Position
5:26398115..26399950
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AA seq
357 aa
AA seq
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MAEQWGKQVFAARRQNEDTTRGSAFTYTNSNHTRDPFEGPNYHIAPRWVYNLATLWMFFV
VVLSVFTNGLVLVATAKFKKLRHPLNWILSNLAIADLGETVFASTISVCNQFFGYFILGH
PMCVFEGYVVSTCGIAALWSLTIISWERWVVVCKPFGNVKFDAKWAIGGIVFSWVWSAVW
CAPPVFGWSRYWPHGLKTSCGPDVFSGSDDPGVQSYMIVLMITCCIIPLAIIILCYLAVW
LAIRAVAMQQKESESTQKAEREVSRMVVVMIVAYCVCWGPYTFFACFAAANPGYAFHPLA
AAMPAYFAKSATIYNPVIYVFMNRQFRTCIMQLFGKQVDDGSEVSTSKTEVSSVAPA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcagagcagtggggaaaacaggtttttgctgcgaggcgacaaaatgaagacacaaca
agaggctctgcttttacttacacaaacagcaatcacactcgagatccctttgagggtcct
aactaccacattgctccgcgttgggtctacaaccttgccacactttggatgttttttgtg
gtggttctgtccgtcttcaccaacggcctggtcttggtggccacagcaaagttcaagaaa
ctgcgccacccactaaactggattttgtccaatcttgccatagctgacctgggagaaaca
gtgtttgccagcaccattagtgtgtgcaaccagttctttggttacttcattctgggacac
cccatgtgcgtgtttgagggctatgtggtctccacttgtggtattgctgctctttggtct
ctgaccataatctcctgggaaagatgggtagtcgtgtgcaaaccttttggaaatgtcaag
tttgatgccaagtgggccattggtggaatcgtcttctcctgggtctggtctgcagtttgg
tgtgcacctcccgtctttggatggagcaggtactggcctcatggactaaaaacctcctgt
ggacctgatgtgttcagtggaagcgatgaccctggagtgcagtcctacatgattgttctg
atgatcacatgctgcatcattcccctggccatcatcatcctgtgttatcttgctgtctgg
ctggcaatccgtgctgttgccatgcagcagaaggaatcagagtcaacccagaaggctgaa
agagaagtgtccaggatggtggtggtcatgatcgttgcttactgtgtgtgctggggaccc
tacacctttttcgcctgctttgctgcagccaaccccggatatgccttccatcctctggct
gctgccatgcctgcctattttgcaaagagcgccacaatctacaaccccgtcatctatgtc
ttcatgaacagacagttccgcacatgcatcatgcagctctttggcaaacaggtggatgat
ggttctgaagtttctacatcaaagacagaggtctcctctgtggctcctgcataa
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