Oryzias latipes (Japanese medaka): 100049275
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Entry
100049275 CDS
T02443
Symbol
thra
Name
(RefSeq) thyroid hormone receptor alpha
KO
K05547
thyroid hormone receptor alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
100049275 (thra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100049275 (thra)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ola03310
]
100049275 (thra)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100049275 (thra)
Nuclear receptors [BR:
ola03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
100049275 (thra)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100049275
NCBI-ProteinID:
NP_001098175
UniProt:
Q766D2
A0A3P9JWP3
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All DBs
Position
19:complement(18271372..18456362)
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AA seq
411 aa
AA seq
DB search
MEHMPKEQDSNSNPSEGEEKQWLNGPKRKRKNSQCSVKSMTGYIPSYLEKDEPCVVCGDK
ATGYHYRCITCEGCKGFFRRTIQKSLHPSYSCKYDGCCIIDKITRNQCQLCRFKKCIDVG
MAMDLVLDDSKRVAKRRLIEENREKRKKEEMVKSLQTRPEPTVDEWDLIRMVTEAHRNTN
AQGAQWKQKRKFLPEKIGQSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMF
SELPCEDQIILLKGCCMEIMSLRAAIRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAI
FDLGKSLAQFNLDDTEVALLQAVLLMSSDRSGLTCVDKIEKCQETYLLAFEHYINYRKHN
IPHFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFEDQEV
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaacacatgcccaaggagcaggactctaactctaacccatcagagggcgaagaaaaa
cagtggctcaatggccctaaaaggaagaggaagaacagccaatgttcagtgaagagcatg
actgggtatattcccagctacctcgaaaaggatgagccatgtgtggtgtgtggtgacaag
gccactggttaccactaccgctgcattacctgtgagggctgcaagggtttctttcgtagg
accattcagaagagcctccacccgtcctactcctgtaagtacgatggctgctgcatcatc
gacaagatcactcgcaaccagtgtcagctgtgccgcttcaagaagtgcatcgatgtggga
atggcgatggacttggtgttggacgactcaaagcgagtggctaaacgccgcctgattgag
gagaacagggagaaacgcaaaaaggaggagatggtgaaatccctccagacccgtccagaa
cctaccgtggacgagtgggacctgatccgcatggtgactgaggcacatcgaaacaccaat
gctcagggcgcgcagtggaaacaaaagcgtaaattcctgcctgagaaaattggccagtct
cctgttgcccccacatcagacggagacaaggtggatctggaagccttcagtgagttcacc
aaaatcatcacccctgccatcacccgtgttgtggactttgccaaaaaactgcccatgttt
tctgagctgccttgtgaagaccagatcatcctgttgaagggttgctgcatggagatcatg
tcgctgcgggctgccatacgctacgacccagagagcgaaacattgacgctgagtggggag
atggctgtgaagcgcgagcagctgaagaacggcgggctcggcgtggtgtctgacgccatc
tttgatttgggcaagagcttggcgcagttcaacctggacgacacagaggtggcgctgctc
caggctgtgcttttaatgagctcagaccgctcaggcctgacctgtgtggacaaaatcgag
aagtgccaggagacctacctgctggcatttgagcactacatcaactaccgcaagcacaac
attcctcacttctggccgaagctcctgatgaaggtgacggacctccggatgatcggcgcg
tgccacgccagccgcttcctccacatgaaggtggagtgccccaacgaactcttcccccca
ctcttcctcgaggttttcgaggaccaggaggtgtga
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