KEGG   Oryzias latipes (Japanese medaka): 100049284
Entry
100049284         CDS       T02443                                 
Symbol
tra2a
Name
(RefSeq) transformer 2a
  KO
K12897  transformer-2 protein
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100049284 (tra2a)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ola01009]
    100049284 (tra2a)
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ola03041]
    100049284 (tra2a)
Protein phosphatases and associated proteins [BR:ola01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     100049284 (tra2a)
Spliceosome [BR:ola03041]
 Common components
  Common spliceosomal components
   SR proteins
    100049284 (tra2a)
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_3 FMP27-BLTP2_C
Other DBs
NCBI-GeneID: 100049284
NCBI-ProteinID: NP_001098178
UniProt: Q8JIN7 Q6I6X8
LinkDB
Position
22:8251735..8254881
AA seq 283 aa
MSDTEKEFKKEDSRGHSRSASPRGSAKSTSHSPARSKDGSHHSRSRSRSRSKSRSRSHRS
SRRRYSRSRSHSRRRRSRSRSRSSDYRRRHRSHSRSPMSNRRRHIGNRGNPDPSCCLGVF
GLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGME
LDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGGGGGGGSRRGSRDYDRGYDRGYDRGYD
RGYDRDYDRYDDREYRSYRRRSPSPYYSRGYRSRSRSYSPRHY
NT seq 852 nt   +upstreamnt  +downstreamnt
atgagtgacaccgaaaaagaattcaagaaggaggattcgagaggtcactcgaggagtgca
tcccctcggggttctgccaaatctactagccactcaccagcgcgttcaaaagatggctcc
caccattcgaggtccagatctcgttcaagatcaaaatctaggtctcggtctcatcgcagt
tcgcgcaggcgctactcccgttctcgttcccattcccgtcgccggcgttccagaagccgg
tctcgtagctcagactaccgccggcgacataggagccatagccgctctccgatgtcaaat
cgccgcagacatattggcaacagggggaacccggaccctagctgctgtctgggtgtgttt
ggtctgagcctgtacaccacagagagagacctgcgcgaagttttctccaagtacggccca
ctgagcgaagtgaacatagtttatgaccaacagtctcgtcgctcgagggggtttgccttc
gtctattttgaaaattctgaggattccaaggaggccaaggagcaagctaatggaatggaa
cttgatgggcgcaggatccgggtggatttttccattaccaaaagagcccacacgccaacc
cctggaatctacatgggacgtcccacgtatggcggaggcggtggaggtggtggtggttct
cgtcgtggttcaagagattatgacagagggtatgaccggggctacgacagaggttatgat
agagggtatgatcgtgactatgatcgatatgatgatcgggagtaccgatcatacaggcgc
agatctccgtctccatactacagcaggggataccggtccagatctcgatcctattcacca
cgtcactactga

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