Oryzias latipes (Japanese medaka): 100049284
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Entry
100049284 CDS
T02443
Symbol
tra2a
Name
(RefSeq) transformer 2a
KO
K12897
transformer-2 protein
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100049284 (tra2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ola01009
]
100049284 (tra2a)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
100049284 (tra2a)
Protein phosphatases and associated proteins [BR:
ola01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100049284 (tra2a)
Spliceosome [BR:
ola03041
]
Common components
Common spliceosomal components
SR proteins
100049284 (tra2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
FMP27-BLTP2_C
Motif
Other DBs
NCBI-GeneID:
100049284
NCBI-ProteinID:
NP_001098178
UniProt:
Q8JIN7
Q6I6X8
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All DBs
Position
22:8251735..8254881
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AA seq
283 aa
AA seq
DB search
MSDTEKEFKKEDSRGHSRSASPRGSAKSTSHSPARSKDGSHHSRSRSRSRSKSRSRSHRS
SRRRYSRSRSHSRRRRSRSRSRSSDYRRRHRSHSRSPMSNRRRHIGNRGNPDPSCCLGVF
GLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAKEQANGME
LDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGGGGGGGGSRRGSRDYDRGYDRGYDRGYD
RGYDRDYDRYDDREYRSYRRRSPSPYYSRGYRSRSRSYSPRHY
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccgaaaaagaattcaagaaggaggattcgagaggtcactcgaggagtgca
tcccctcggggttctgccaaatctactagccactcaccagcgcgttcaaaagatggctcc
caccattcgaggtccagatctcgttcaagatcaaaatctaggtctcggtctcatcgcagt
tcgcgcaggcgctactcccgttctcgttcccattcccgtcgccggcgttccagaagccgg
tctcgtagctcagactaccgccggcgacataggagccatagccgctctccgatgtcaaat
cgccgcagacatattggcaacagggggaacccggaccctagctgctgtctgggtgtgttt
ggtctgagcctgtacaccacagagagagacctgcgcgaagttttctccaagtacggccca
ctgagcgaagtgaacatagtttatgaccaacagtctcgtcgctcgagggggtttgccttc
gtctattttgaaaattctgaggattccaaggaggccaaggagcaagctaatggaatggaa
cttgatgggcgcaggatccgggtggatttttccattaccaaaagagcccacacgccaacc
cctggaatctacatgggacgtcccacgtatggcggaggcggtggaggtggtggtggttct
cgtcgtggttcaagagattatgacagagggtatgaccggggctacgacagaggttatgat
agagggtatgatcgtgactatgatcgatatgatgatcgggagtaccgatcatacaggcgc
agatctccgtctccatactacagcaggggataccggtccagatctcgatcctattcacca
cgtcactactga
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