Oryzias latipes (Japanese medaka): 100049292
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Entry
100049292 CDS
T02443
Name
(RefSeq) semaphorin-3ab isoform X1
KO
K06840
semaphorin 3
Organism
ola
Oryzias latipes (Japanese medaka)
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Gene cluster
GFIT
Motif
Pfam:
Sema
V-set
PSI
Ig_3
ig
Ig_6
Ig_2
I-set
Motif
Other DBs
NCBI-GeneID:
100049292
NCBI-ProteinID:
XP_004083100
UniProt:
H2MJK8
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Position
23:16039201..16085334
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AA seq
859 aa
AA seq
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MDYLFGIVVLLCGAAQPGRGAEPKHNVPRLKLSFKEMLDSSNLVTFNGLANSSSYDTFLL
DEERGRLLVGAEDHIFSFDLVNINRDHKQIAWPATPSKRDECKWAGKDLGKECSNFVRVL
QPYNQTHMYICGTGAFHPICAFLEMGKKSEDNIFRLASQFENGRGKSPYDPKMLSASILI
DGELYSGTSADFMGRDFAIFRTLGDHHPIRTEQHDSRWLNDPRFIGVHLIPESDNPEDDK
IFLFFKENAMDGEHTGKATIARIAQLCKNDMGGHRSLVNKWTTFLKARLVCSVPGVNGID
THFDELQDVFLMSSKDPKNPVIYAVFTTSSNIFKGSAVCMYNMADIRRVFLGPYAHRDGP
NYQWVPFQGRVPYPRPGTCPSKTFGGFDSTKDLPDDVITFARGHPAMYNPVHPIGGQPIM
VRTDVDYQFTQLVVDRVEAEDGQYDVMFIGTDMGTVLKVVTIPRESWHDLEEVVLEEMTV
FREPTPITAMELSTKQQQLYLGSALGVSQMSLHRCEVYGKACAECCLARDPYCAWDGAEC
SRYFPTAKRRTRRQDIRNGDPLSQCSDLQHHDDVDGLGGSVEDRSVFGVENSSMFLECSP
KSQRALIYWQLQRPNDDRKEEIKLDERVLRTDQGLLIRSLTQSDAGVYHCHAIEHGFIQP
LLRLSLQIIPTQKLADILPGLPGAAGGGSGHSPKHRVWYRDFLSLLDHPELNSVEEFCDR
VWKKERKQKRVKTSNGNNQSKPDSASRPRALAPTAQKQQSGPPPGKQWPQAGAQTAGGST
RIQNTQKGQENPGMLNTQALKNNQKTQNLPKGQGTVAGSQAAGGSRVNSQHTAKWRRMQD
NKKGRNRRTHELQRPPRSV
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggattacctgtttgggattgtagtgctgctttgtggggcagcccagccaggaagggga
gccgagcccaagcacaatgtacccagactaaagctgtcattcaaggagatgctagattct
agtaacctcgtcactttcaacggcttagccaacagttcgagctacgacacctttctgttg
gacgaagagcgagggagactactggtcggagcagaggaccatatcttctcatttgacctt
gtcaatatcaacagagaccataaacagattgcgtggcctgccaccccttcaaaaagggat
gaatgcaagtgggcagggaaagacctagggaaagagtgctctaactttgttcgggttctt
caaccatacaaccaaacccacatgtacatctgtggaacaggagccttccatccgatctgc
gcttttctggaaatgggcaagaagtcagaggacaacatctttcgcctggcctcacaattc
gagaatggccgcgggaaaagcccctacgaccccaaaatgctgtcagcctcaattttgatt
gatggagagctgtactctggcacatctgctgatttcatggggagagactttgccattttc
cgtacgctgggggaccatcatccaatcagaacggagcagcatgattcaagatggctaaat
gaccccaggttcataggcgtccacttgatcccggagagtgacaaccctgaggacgacaag
atattcttgtttttcaaagagaacgccatggatggagagcacaccgggaaggctaccatt
gccaggatagcacaactgtgtaagaatgacatgggtggtcacaggagccttgtaaacaag
tggaccacttttctcaaagcgcggcttgtgtgttctgttcccggggtcaacggcattgac
acacactttgatgagctgcaggacgtgtttctcatgagctccaaggacccgaagaatcca
gtgatctacgctgtgttcaccacatccagtaacatattcaaaggctcagcagtctgtatg
tacaacatggccgacatcagaagggtatttctgggaccctacgcccacagagatggaccc
aactaccagtgggtgcccttccagggaagagtcccctaccctcgtccaggcacttgcccc
agcaagacatttggaggctttgactccaccaaagaccttcctgacgacgttatcaccttt
gcgaggggccaccctgccatgtacaacccagtacacccaatagggggccaacccatcatg
gtgcggacagatgtggactaccagttcactcagctggtcgtggacagagtggaggcggag
gacgggcagtatgatgtcatgttcataggcacagacatgggaacggtcctgaaggtggtg
acaatccccagagagagctggcatgacctagaggaagtggtgctggaggaaatgaccgtc
tttagggagcctacacccataactgccatggaactgtccacaaaacagcaacagctgtac
cttggctcagccctgggtgtatcgcagatgtctttacaccgttgtgaggtgtacgggaag
gcctgcgccgagtgctgcctggccagagatccttactgcgcttgggacggggccgagtgc
tcgagatactttccaacagccaagaggagaacccggagacaggacatccgaaatggagac
cctctgtctcagtgctcagacctccagcatcacgacgacgtggacggcttgggaggcagc
gtggaggacagaagtgtgttcggtgtggagaacagcagtatgttcctggagtgcagccct
aagtctcagagagcgctcatctactggcagctgcagaggcccaacgatgaccgcaaagaa
gagatcaagctggacgagcgagttctgcgcacagaccagggcctgctgatccgcagcctg
acccagtccgatgcgggtgtgtaccactgccatgccattgaacacggcttcattcagccc
ctgctgcgcctcagccttcagatcattcccactcagaagctggctgacatcttacctgga
cttcccggggcagcaggaggaggctcgggtcactcacccaagcacagggtgtggtaccgg
gacttcctgtctctcctcgaccatccggagttgaacagcgtggaggagttttgcgacaga
gtttggaaaaaggagcgaaaacaaaagagggtgaagacttccaacggcaacaaccagagc
aaacccgacagcgccagccggccgagagcgttggcccctactgctcagaagcagcaaagc
ggtccgcctcctggcaagcagtggcctcaggctggagctcaaacagctggaggctcgaca
cgcatccagaacactcaaaaaggtcaagaaaacccaggtatgttgaacacccaagccttg
aagaacaatcagaaaacgcaaaaccttccaaagggtcagggcaccgtggcgggctctcag
gctgcaggaggatcgcgggtgaacagccagcacacagccaagtggagacggatgcaggac
aataagaagggacgcaacaggaggacccatgagctccaaaggcccccgcgaagcgtttga
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