Oryzias latipes (Japanese medaka): 100049312
Help
Entry
100049312 CDS
T02443
Name
(RefSeq) transcriptional enhancer factor TEF-5 isoform X1
KO
K09448
transcriptional enhancer factor
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100049312
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
TEA domain
100049312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YBD
TEA
Cass2
Ste5_C
Motif
Other DBs
NCBI-GeneID:
100049312
NCBI-ProteinID:
XP_023812390
LinkDB
All DBs
Position
7:complement(13422079..13437744)
Genome browser
AA seq
379 aa
AA seq
DB search
MYGRNELIARYIKLRTGKTRTRKQVSSHIQVLARKRVREYQASIKVSSHLQVLAKRRSRE
IQSKLKAMNLDQVSKDKALQTVANLSSAQIVSASVMKPQTPFPASVRFWPGPVPGQAGHS
QDIKPFAQPPYTTLPTPVPAPIGYEALPPPRPPTIAPPVWQDRTIASAKLRLLEYSAFME
TQRDRETYKHLFVHIGPSNPGYSDPVLESIDVRQIYDKFSEKKGGLKELYEKGPHNAFFL
VKFWADLSSDVEEGSGVFYGVSSQYSGTENVTISVSTKVCSFGKQVVEKVETEYAHLDGG
KYMFRIHRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVSNRETQETLLCIAFVF
EVSTSEHGAQYHVYRLVND
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtatgggcgaaacgagctgattgctcgctacataaaactacgaacagggaagacacga
acgcgcaaacaggtatcaagtcacatccaggttttggcccgtaagagggtgcgagaatac
caggcaagcatcaaggtctctagtcacctgcaagtgttggccaaaagaaggtctcgtgag
attcagtctaagctcaaggccatgaacttggaccaggtgtccaaagacaaagcgctgcag
acagtggccaacctgtcgtctgctcagattgtgtctgcgagtgtcatgaaacctcaaacg
cccttcccagcatcagtcagattttggccaggtcctgtaccgggacaggctggacattct
caggacattaagccctttgcacagcctccatacacaacactaccaacccctgtccctgca
cctattggttatgaggcactgccgccccctcgccctccaactatagctcctcctgtatgg
caagacagaaccattgcctcagcgaaactacggctgctggagtattctgcgtttatggag
acccagagagacagggagacgtacaaacacctttttgtacacattgggccgtcaaaccca
ggctacagcgatcctgtgctggagtccatagatgtgaggcagatttacgacaaattctct
gagaagaaaggaggtttgaaggagctgtatgaaaaagggccgcacaacgccttttttctc
gtcaaattttgggctgacctcagcagtgacgtcgaggaaggttctggcgtgttctatgga
gtgagcagccagtacagtggaacggaaaatgtcaccatcagtgtttctaccaaggtgtgc
tcctttggaaaacaagtggtggagaaggttgagacagaatatgcacacctggatggagga
aagtacatgtttcgaattcaccgctcacccatgtgtgaatacatgatcaacttcatccac
aagctgaagcacctgccagaaaaatacatgatgaacagtgtactagagaatttcactatt
ctgcaggtggtgtctaacagagaaactcaggagactctgctgtgcattgcctttgtgttt
gaagtgtccacaagtgaacacggagcacagtaccacgtttaccgactggttaacgactag
DBGET
integrated database retrieval system
