Oryzias latipes (Japanese medaka): 100049390
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Entry
100049390 CDS
T02443
Name
(RefSeq) xylosyltransferase 1
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ola00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
ola01100
Metabolic pathways
Module
ola_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100049390
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
100049390
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ola01003
]
100049390
Enzymes [BR:
ola01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
100049390
Glycosyltransferases [BR:
ola01003
]
O-Glycan biosynthesis
Glycosaminoglycan
100049390
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
100049390
NCBI-ProteinID:
XP_004066244
UniProt:
H2MDR6
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Position
1:30370329..30486625
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AA seq
939 aa
AA seq
DB search
MVGGSCARRLARRSRSALIAALTVLLVQTLIVWNFSTLDSGEESAGSSVRGKRDRVAGNK
AAGSDYFQRAVRQPPGQHLPSPGRGASRHKQQPDGYYSHRPKEKSRIDSNNENSVPKDFE
NIDNSNFGARSQPHRQAPSSKQQEHLQEKTHTQQQTWRDSSPSLGRSSNEVLPVGHQSLA
AGNSTLPPGVMVEPQRHYHASQAQHVQPQHRHQHPHRKQATAATAEVTYNQPPKCEISGK
EAISALSRAKSKDCRQQIAEVYCRHREGRLMPEKVTRYCPLEGKANVNIQWDEHSAESFP
SNPVRIAFVLVIHGRASRQFQRLFKAIYHTSHFYYIHVDQRSNYLHRQVQIMAMKYPNVR
VTPWRMATIWGGASLLTMYLRSMADLLAMRDWSWDFFINLSAADYPIRTNNQLVAFLSKY
RDMNFIKSHGRDNARFIRKQGLDRLFFECDTHMWRLGDRKIPEGISVDGGSDWFLLNRMF
VDYVINSKDDLVTSMKRFYAYTLLPAESFFHTVLENSAHCESMVDNNLRITNWNRKLGCK
CQYKHIVDWCGCSPNDFKPADFPRFQQTVRPTFFARKFEASVNQEIVNQLDAYLFGPFPQ
GSPALNSYWENAYDEPDGVASLSDTMLTYYHSFSRMGLARAAASLQGNPNDHSCRYFPMG
HPVSVHLYFHSDQFQGYLVKHHANNLATRKLETMETWVAPKKSFKLTTPPTSTFSRLQFA
EVGTEWDAKERMFRNIGGLMGPMDETVGMQKWNKGPNVTVTVVWIDPTNVIAATYDILID
STAEFTHYRPPLNQPLRPGVWTLRILHRWSPVAEIQFLIAPLAYSKHQPIRREDALKLHN
GPVKNSYMEQSFHGLNPVLNIPVSLAYVEQAQRNAALTGLELERWIDSLVGQLWEAADVC
AVGPTSCPVMQACAKSPWSSLSPDPKSQLGEPRADGRIR
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggtcggcggctcgtgtgcgcgcaggctggcccgccggtcccggtccgcgttgatcgcg
gcgctcacggtgctgctggtgcagaccctgatcgtgtggaacttcagcactctggactcc
ggggaagagagcgcgggctccagcgtgcgggggaagagggaccgggtcgcgggcaacaaa
gccgctggcagcgactatttccagcgcgcagtccggcagccgccgggccaacatcttcct
tctccggggaggggggcgtctcgacacaaacagcagccggatgggtattactcccaccgc
ccgaaggagaaaagtcgaattgacagtaacaacgagaactctgtgcccaaagactttgag
aacatagacaacagcaactttggagcacgctcgcagccacacagacaagctcccagcagt
aagcagcaggagcatctgcaggaaaagacccacactcagcagcagacctggagagacagt
tcccccagcctgggacgcagctcaaacgaggttctgcctgtgggccaccagtccctggca
gccggaaacagcaccttacctcctggcgtcatggtggaaccacagagacactaccatgcc
tcccaggcccagcacgttcagccacagcacaggcatcagcacccccacaggaagcaggcc
actgcagccacagcggaggtgacgtacaaccagccccccaagtgcgagatcagtgggaag
gaagccatttctgctctgtccagagctaagagcaaagactgccggcagcagattgctgag
gtgtactgcaggcacagggaggggcgcttaatgccagagaaagtcactcggtactgcccc
ctggaaggtaaagctaacgtgaacatccagtgggacgagcactctgccgagagctttcca
tcaaaccctgtgaggatcgcgtttgtcttagtcattcacggacgagcctctcgccagttt
cagcgcctcttcaaagccatctaccacacctcccacttctattacatacatgttgaccag
agatccaactacctgcacaggcaggtccagatcatggccatgaagtatcccaacgtgagg
gtgacaccatggcgcatggccaccatctggggcggggccagtctgctgaccatgtatcta
cgcagcatggctgacctgctggcaatgagggactggagttgggatttcttcatcaatctg
agcgctgctgattaccccatcaggactaataaccagctggtggccttcctgtccaaatac
agagacatgaactttatcaagtcccatggcagggacaatgcacggttcattcggaagcag
ggtctggatcgccttttctttgagtgcgacacccacatgtggcggctgggagaccggaaa
atcccagaaggcatctctgtggacggaggctccgactggttccttctcaaccgtatgttt
gtggactacgtcattaactccaaggacgatctggtcaccagcatgaagcggttttatgcc
tacactttacttcctgctgagtcgttcttccacacggtgctggagaacagcgctcactgt
gagagcatggtagacaacaacctgcgcatcacaaactggaaccgtaaactgggctgtaag
tgtcagtacaagcacatcgtggactggtgcggatgctcgcccaatgacttcaagccggca
gacttcccccgcttccagcaaacagtgcggcccaccttctttgccaggaagttcgaagcc
agtgtcaaccaggagattgtgaaccagctggacgcctatctgttcgggccctttccccag
ggatctccagcactgaactcttactgggagaatgcgtacgatgagccggatggtgtggcc
agcctgtctgacacaatgctcacctactaccactccttctcacggatgggcctggcgcgg
gcagcagcctccctgcagggaaaccccaacgatcacagctgcaggtacttccccatgggc
cacccggtgtccgtccatctctacttccactcagaccagttccagggctatctggtcaag
caccacgccaacaacctggccacaagaaagttggagaccatggagacctgggtagcaccc
aagaagagtttcaagctaaccaccccccccacaagcacattcagccggctgcagtttgca
gaggttggcacagagtgggacgctaaagaacggatgttcagaaatatcggtggcctcatg
ggtcccatggatgagacggtgggcatgcagaagtggaataaagggcccaacgtcacagtg
actgttgtgtggatcgatccaaccaacgtcattgcagccacatatgacatactaatcgac
tcaactgcagagttcacccactaccgccccccactcaaccagcccctgcggcccggcgtg
tggacgcttcgcatcctgcaccgctggagccccgtggctgaaatccagttcctgattgcc
cctctggcctacagcaagcaccagcccatacgtcgagaggacgctttgaagctgcacaac
gggccggtgaagaacagctacatggagcagagtttccatggcctgaacccggtgctcaac
atcccggtcagcctggcttatgtggagcaggcccaacggaacgcggccctcaccggcctg
gagctcgagcgctggatagacagtctagtgggccagctgtgggaggcggctgacgtgtgc
gccgtcggtcccacgtcctgtcccgtcatgcaggcgtgcgccaagagtccgtggagctca
ttaagcccagaccccaaatcccagctgggagagccccgagctgacgggcgcatcaggtag
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