Oryzias latipes (Japanese medaka): 100049394
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Entry
100049394 CDS
T02443
Name
(RefSeq) transducin-like enhancer protein 3-A isoform X1
KO
K04497
groucho
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04310
Wnt signaling pathway
ola04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
100049394
04330 Notch signaling pathway
100049394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ola04812
]
100049394
Cytoskeleton proteins [BR:
ola04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
ADF / Cofilin
SCMC complex
100049394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLE_N
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
Beta-prop_RIG_2nd
HALZ
Beta-prop_IP5PC_F
WD40_RFWD3
LCD1
Motif
Other DBs
NCBI-GeneID:
100049394
NCBI-ProteinID:
XP_023811537
LinkDB
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Position
6:complement(16217562..16235615)
Genome browser
AA seq
774 aa
AA seq
DB search
MYPQGRHPAPHQPGQPGFKFTVAESCDRIKDEFQFLQAQYHSLKVEYDKLANEKTEMQRH
YVMYYEMSYGLNIEMHKQTEIAKRLNAILAQIMPFLSQEHQQQVAQAVERAKQVTMTELN
AIIGVRGLPNLPLTQQQTPYPALMQQQLQAQHLSHAAHGPPVQLPPHPSGLQPPGIPPVT
GSGSGLLALGALGSQAHLPVKDEKNHHDLEHRENTNNSISPSESLRTSSEKHRSSSDYSL
DSKKRKVEEKDSVSRYDSDGEKSDDLVVDVSNEDPATPRASPAHSPPENGIDKPRPAKKD
TPNSPASVASSGSTPSSKAKELSHNDKSSTPGLKSNTPTPRNDAPTPGTSSTPGLRPILG
KPPGMEALAAPALRTPLSYPTPFAMMGHHEMNGGLTSPGVYAGLHISPQMSAAAAAAYGR
SPMGFDPHTHMRAPGLPASLTSISGGKPAYSFHVSADGQMQPVPFPPDALIGPGIPRHAR
QINTLSHGEVVCAVTISNPTRHVYTGGKGCVKIWDISQPGSKSPVSQLDCLNRDNYIRSC
KLLPDGRTLIVGGEASTLTIWDLASQTPRIKAELTSSAPACYALAISPDAKVCFSCCSDG
NIAVWDLHNQTLVRQFQGHTDGASCIDISHDGTKLWTGGLDNTVRSWDLREGRQLQQHDF
TSQIFSLGYCPTGEWLAVGMESSNVEVLHHSKPDKYQLHLHESCVLSLKFAYCGKWFVST
GKDNLLNAWRTPYGASIFQSKESSSVLSCDISTDDKYIVTGSGDKKATVYEVIY
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtacccacaaggccgccatccggctccacatcagccgggccagccgggcttcaagttc
actgtagcggagtcgtgcgatagaattaaagacgaatttcagttcctgcaagcacagtat
cacagtcttaaggtggagtatgacaaactggcaaatgagaagacagagatgcaacgccac
tatgtcatgtattatgagatgtcctacgggttgaacatcgagatgcacaaacagacagag
attgccaaacggctcaacgcaattttagctcaaattatgcctttcctgtcacaagagcac
caacagcaggttgctcaggcagtggagagggcaaagcaggtgactatgaccgagctgaat
gccatcatcggggtacgtggacttcccaatctgcctctcacccagcagcaaactccttac
cctgctctcatgcagcagcagctccaggctcagcacctctcccacgccgcccacgggcct
ccagtccagctgccgccccacccctcgggtctgcagccgcctggcattccccctgtgacg
ggatccggatcaggtctgctggccctgggggctttgggcagccaggctcaccttccagtg
aaggatgagaagaaccaccacgatctcgaacacagagagaacacgaacaactcgatatct
ccatcggaaagcttgcggacaagcagcgagaagcaccgcagctcctccgactacagtttg
gactccaagaagcgtaaagtggaggaaaaggacagtgtgagcagatatgacagcgatgga
gagaaaagtgatgatttggtggtagacgtgtccaatgaggatcctgccactccccgagcg
agcccagcccattcgccgcctgaaaatggcattgataaaccccgcccagctaaaaaggat
acgcccaacagtccagcgtctgtggcgtcctctggaagcaccccatcctccaaggccaag
gagctaagtcataatgacaaatcctctacgcctggcctcaaatccaacacccccaccccc
cgcaacgatgcccccacccctggcaccagctccactcctgggctcaggcccatcctgggc
aaaccaccaggcatggaggctttagcagcaccagcgttgcgtacccccctgtcctatcct
accccatttgccatgatgggccatcatgaaatgaacggaggcttgacgagccccggggtg
tacgctggtctgcacatctcccctcagatgagtgccgcagcagctgcagcttatggacgt
tcccccatggggtttgatcctcacacccacatgagagccccaggccttccagccagcctc
acgtccatttctggtggcaaaccggcttactcctttcacgtcagtgcagatggccagatg
cagcctgtacccttcccaccagatgccctcattgggcctggaatcccccgacatgcccgt
cagatcaacacacttagccacggagaggttgtgtgtgctgttaccataagcaaccctacg
cgtcatgtctacactggtggcaaaggctgtgtcaaaatctgggacatcagccaacccggc
agcaagagccccgtatcccaactggattgtctgaacagggataactacatccgctcctgt
aagctgctgcccgatggtcgcacattgattgttggaggagaggccagcactttgaccatc
tgggatctggcctctcagaccccccgcatcaaggctgagcttacctcttcagccccagcg
tgttacgccttggccatcagccctgatgccaaagtctgcttctcctgctgcagtgatgga
aacattgccgtttgggacctgcacaaccagactcttgttaggcagttccagggtcataca
gacggggctagctgtattgacatatcccacgatggcaccaagctgtggacaggcggtctt
gataatacggttcgctcttgggatctaagggagggtcgacagctgcagcagcatgacttc
acctcacagatcttctccttgggctactgtccaactggagagtggctcgctgtgggcatg
gagagcagcaacgtagaagtgcttcaccactcaaagcctgacaagtatcagctacacttg
catgagagctgcgtcctctcccttaagtttgcctactgtggcaaatggtttgtaagcact
gggaaggacaatctgttgaatgcttggaggactccttatggcgccagcatattccagtcc
aaggaatcctcatctgtcctgagctgcgacatctcaacagacgacaagtacatagtgacg
ggctctggtgacaagaaagccaccgtttatgaagtgatctattag
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