Oryzias latipes (Japanese medaka): 100049404
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Entry
100049404 CDS
T02443
Symbol
nkx2-1
Name
(RefSeq) homeobox protein Nkx-2.1
KO
K09342
homeobox protein Nkx-2.1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100049404 (nkx2-1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
100049404 (nkx2-1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100049404
NCBI-ProteinID:
XP_004082102
UniProt:
A0A3B3I233
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All DBs
Position
22:862595..866881
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AA seq
346 aa
AA seq
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MSMSPKQTTPFSVSDILSPLEESYKKVSMDNNNLGAPLTSYRQPQVSQAAMQQHHMGHNG
TVSAAYHMTAAGVSQLSHTAMGGYCNGNLGNMGELPSYQDGMRGSAAATGWYGANPDPRF
STISRFMGSSSGMNMGSMGSLGSLADVGKGMSSLSSTPRRKRRVLFSQAQVYELERRFKQ
QKYLSAPEREHLASMIHLTPTQVKIWFQNHRYKMKRQAKDKASQQHLQQDGGSCQQQQQQ
QQSPRRVAVPVLVKDGKPCQGSGHTPTSSAQTHHQQGGNVMIMSSGASGLGHQSQQVGST
GHSPDLASSSPPSMQSQVAGLSHLNSPGAEYGSALQCSALLYGRTW
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagccccaagcagacgactcctttttctgtttccgatatcttgagtcccctt
gaggagagctataagaaagtaagtatggacaacaacaacctgggggcgcctctcacttct
taccggcagccgcaggtctcccaggccgctatgcagcagcaccacatgggccacaacggg
accgtgtcggcggcttaccacatgaccgcggcgggggtctcccagctgtcgcacaccgcc
atggggggctactgtaacggcaacctgggcaacatgggcgagctgccctcctaccaggac
ggcatgaggggcagcgccgcggccaccggctggtacggagccaacccggacccgcgcttc
tccaccatttcccgcttcatgggctcgtcgtcgggcatgaacatgggcagcatggggagc
ctcgggtccctggcagatgtggggaaaggcatgagctccctgtccagcaccccgaggcgg
aagcggcgcgtgctgttctcccaggcgcaggtgtacgagctggaacggcgcttcaagcag
cagaagtacctgtctgcgccggagagggaacacctggcaagcatgatccacctcaccccg
acccaggtgaaaatctggttccagaaccaccgctacaagatgaagaggcaggcgaaggac
aaggcgtcgcagcagcacctgcagcaggacggcggctcctgccagcagcagcagcagcag
cagcagtccccgcggagggtggccgtgccggtgctggtgaaggacgggaagccgtgccag
ggcagcggccacacgcccacgtcctccgcgcagacgcaccaccagcaaggaggcaacgtc
atgatcatgtccagcggcgcgtccggcctcgggcaccagagccagcaggtgggaagcacg
ggtcactccccggacttggcgtcgtccagtccgccgtccatgcagagccaggtggccggc
ctctcccacctcaactcccccggcgcggagtacggctcggccctgcagtgttccgcgctg
ctgtacggcaggacgtggtga
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