Oryzias latipes (Japanese medaka): 100049426
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Entry
100049426 CDS
T02443
Name
(RefSeq) photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ola03400
]
100049426
Enzymes [BR:
ola01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
100049426
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
100049426
Prokaryotic type
100049426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
100049426
NCBI-ProteinID:
NP_001098271
UniProt:
Q91186
LinkDB
All DBs
Position
17:complement(14696439..14703692)
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AA seq
504 aa
AA seq
DB search
MSDKKKRKATATAGDAEPSAKQPREDKPTKAAGWLHSLIRQQREDKKDMKFSKKRQRFIS
ETQKVRQGSGGVLYWMLRDQRVQDNWALIRAQQLAAKESLPLHVCFCLVVPKSELSTLRH
YSFLLKGLEEVQKECKHLNIQFHLLHGAAGDVLPGFVTGHNFGAVVTDFSPLREPLQWLE
AVKKGLPEDIPFIQVDAHNIVPCWVASPKLEYSARTIRGKITNLLSEFLTDFPLVDKHPF
SATKTAKAVDWDKTLASLKVDRTVGEPKLAKPGTEAGLAMLESFIDVRLKLFGTQRNDPN
AAALSQLSPWLRFGQLSAQRVALQVRKNSSPSVPAFIEELVVRRELTDNFCFYNKNYDSV
TGAYEWAQKTLKDHAKDKREYLYTREQFEKAQTHDKLWNAAQIQMVTEGKMHGFLRMYWA
KKILEWSTSPEEALSIALYLNDRYELDGQDPNGFVGCMWSICGIHDQGWAERAVFGKIRF
MNYKGCLRKFNVAQFERKYCSKKV
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaagaagaagcgcaaagcgacagccaccgctggcgatgcggagcccagcgcc
aagcaaccgcgggaggacaagccgacgaaggcggcgggctggctgcacagcctgatccgg
cagcagagggaggacaagaaggacatgaagttcagcaagaagaggcagcgtttcatcagt
gagacgcagaaggtccggcagggctcaggaggggtgctgtactggatgctgagggaccag
agagtccaagataactgggcgctgatccgcgcgcagcagctggccgccaaagagagcctc
cctttgcacgtctgcttctgcctggtggtgccaaaatcagagctgtccacactgagacat
tattcctttctgctgaaggggttggaagaggttcaaaaggaatgcaaacacttgaacatc
cagttccatctgctgcacggagcagctggcgacgtgctccccggcttcgtgactggccac
aactttggggccgtggtgacggacttctcccccctcagagagcctctgcagtggctggaa
gctgtgaaaaagggacttccagaagacattcccttcatacaggtggatgcccataatatt
gttccctgctgggtagcatcccctaagctggagtactctgccagaaccatcagagggaaa
atcactaaccttttgtctgagttcctcaccgatttccctctggtggacaaacacccgttc
tcagccacaaaaacagcaaaggcggtcgactgggacaaaactctggcctcgctaaaggtg
gacagaacagtcggggagcccaagttggccaagccgggcaccgaggccgggctggccatg
ttggagtccttcatcgacgtgcgtctgaaactgttcggcactcagcgcaacgacccgaac
gccgccgccctcagccagctgtcgccatggcttcgcttcggccagctttcagcccagcgt
gtggcgctgcaggtgcggaagaattccagtccgtccgtgcctgccttcatcgaggagctg
gtggtgcgcagagagctgacggacaacttctgcttctacaacaagaactacgacagcgtg
acgggtgcgtacgaatgggctcagaagactctgaaggatcacgccaaggacaagcgagag
tacctctacaccagagagcaatttgagaaagcgcagactcatgacaagctgtggaacgca
gctcagatccaaatggtaactgaagggaagatgcatggattcttgaggatgtactgggcc
aaaaagattctggagtggagcacctcgccggaggaggcgctctccatcgctctgtacctg
aacgatcgctatgagctggacggtcaggaccccaacggttttgttggatgtatgtggtca
atctgcggcatccatgaccagggctgggcagagagagcggtttttgggaaaatccgcttc
atgaactacaaaggctgccttcggaagtttaacgtggcgcagtttgagaggaagtactgt
tctaaaaaagtctga
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