Oryzias latipes (Japanese medaka): 100049470
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Entry
100049470 CDS
T02443
Symbol
cnot9
Name
(RefSeq) CCR4-NOT transcription complex subunit 9
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100049470 (cnot9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
100049470 (cnot9)
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
100049470 (cnot9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
Motif
Other DBs
NCBI-GeneID:
100049470
NCBI-ProteinID:
XP_004081716
UniProt:
A0A3P9IZU9
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All DBs
Position
21:complement(16421232..16428300)
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AA seq
299 aa
AA seq
DB search
MLATGAAVTNVTALAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSC
GTIAALLQEIVNIYPSINPPTLTAHQSNRVCNALALLQCVASHPETRSAFLAAHIPLFLY
PFLHTVSKTRPFEYLRLTSLGVIGALVKTDEQEVINFLLTTEIIPLCLRIMESGSELSKT
VATFILQKILLDDTGLAYICQTYERFSHVAMILGKMVLQLSKEPSARLLKHVVRCYLRLS
DNLRAREALRQCLPDQLKDNTFAQVLKDDTTTKRWLAQLVKNLQEGQVTDARGIPLAPQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttggcaacgggagcggctgtaaccaacgtcacagccctggcccaagtagaccgtgag
aagatttaccagtggatcaatgagttgtccagtccagagactagagagaatgctttgctg
gagctcagcaagaagcgagaatccgtgccagacttggccccaatgctctggcattcatgt
ggcaccattgctgccctgttgcaggaaatagtaaacatctatccgtctattaacccacca
acccttacagcccaccagtcaaatagagtgtgtaatgccctggcacttttgcagtgtgtt
gcctcacatccagagacacggtcagcatttctagctgcccatattcctcttttcctttac
ccttttctgcacactgtgagtaaaacgcgtccatttgagtacctgcgacttaccagtcta
ggagtcataggtgcattggtgaaaaccgatgaacaagaagtgataaacttccttcttact
acggaaatcatcccactctgtcttcgcatcatggaatctggaagtgaactctccaagacg
gttgctactttcatactgcaaaagatcctgctggatgacactgggttggcttacatatgt
cagacttatgaacgtttttcccatgtcgccatgattcttggcaagatggtgctgcagctc
tccaaagagccatcagctcgtctgctgaaacacgttgtccgctgctatcttcgcctctct
gataacctaagagccagagaggcccttcgtcagtgtctaccagaccagttaaaggacaac
acctttgcacaggtgctgaaggacgacaccaccaccaagcgctggctcgcacaactagtg
aagaacttgcaggaaggccaagttaccgatgctagaggcatcccacttgctccacagtga
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