KEGG   Oryzias latipes (Japanese medaka): 100049510
Entry
100049510         CDS       T02443                                 
Name
(RefSeq) RNA binding protein 42Sp43
  KO
K09191  general transcription factor IIIA
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ola03000]
    100049510
   03021 Transcription machinery [BR:ola03021]
    100049510
Transcription factors [BR:ola03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    100049510
Transcription machinery [BR:ola03021]
 Eukaryotic type
  RNA polymerase III system
   Basal transcription factors
    TFIIIA
     100049510
SSDB
Motif
Pfam: zf-C2H2 zf-C2H2_4 zf-H2C2_2 TFIIIA_zf-C2H2 Zap1_zf1 zf-C2H2_8 zf-C2H2_jaz Glycos_transf_2
Other DBs
NCBI-GeneID: 100049510
NCBI-ProteinID: NP_001098333
UniProt: Q9W7D7
LinkDB
Position
8:complement(5907024..5908964)
AA seq 368 aa
MMKAEKAVGAGPQQVFTCTHAGCGACFPREWKLKAHETVHTGERPCACPTAGCGSLFKRT
SHLKRHVLQHKGVKGFQCKFANCAKSFIDAQRLKKHQNSAHGNHKFKCNQPKCSLSFKKR
RLLKLHLKEHNVHPNFKCSNIRCTATFDSHIARKAHEKKHAGYSCPHKDCQVVEHTWSKL
QRHLAKHPVSFTCGVCEKVYDKAGALRRHKRIHASHKPVLLCPRANCQAYFTTTFNLEHH
IRKVHLQLLKYKCFFPDCPRTFVMRESMHRHMVHHDPSAITVKKPQRPKKSWQKRLNGHN
QPFVEENLQRLFALRMRISRRAKVETNLAGLFNERKIPHFVDPEVNLRNLFGIKPPIPLE
SPAVAPVK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgatgaaagctgagaaagctgttggggctgggccccagcaggtgttcacctgcacccac
gccggatgtggagcctgcttcccgagggagtggaaactaaaggcgcacgaaactgtgcac
accggagagcgtccttgcgcgtgcccaacagccgggtgtggtagtctcttcaagagaaca
tcccatctgaaaagacacgtgctccagcataaaggagtcaaagggttccaatgcaagttt
gcaaattgcgcaaagagtttcatcgacgctcaaaggctgaagaagcaccagaacagcgct
catgggaatcacaaattcaagtgtaatcaacccaagtgctccttgagcttcaagaagcgc
agattgttgaagctgcatttaaaggagcataatgtccatccgaacttcaaatgttctaac
attaggtgtactgcaacgtttgactcccatattgcacgcaaagcccatgagaagaagcat
gcaggttatagttgccctcacaaagactgccaggttgttgaacacacctggagcaaactt
cagaggcacctggccaaacacccagtctcatttacctgtggcgtgtgcgagaaggtgtac
gacaaagcaggtgctctgcggcggcacaaacggatccacgcttcccataaacctgtgctg
ctgtgtccaagagctaactgccaggcctacttcaccacgacctttaacctagagcatcac
attcgcaaagtgcatctccagctcctgaagtataaatgtttcttccccgactgcccacgc
acatttgttatgcgggagagcatgcatcgacacatggttcatcatgatccaagtgccata
actgtaaagaaacctcagaggccaaagaaatcctggcagaaacgtctgaatggacacaac
cagccctttgtggaggaaaacctgcagcggctcttcgctctgcgcatgcgaatctccaga
cgtgccaaagtggaaaccaaccttgccggtctcttcaacgagcgcaagatccctcatttc
gttgacccagaggtcaacctgcgtaacctgtttggcatcaaacctcccattcctttggaa
agtcctgctgtggcaccagttaaatga

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