Oryzias latipes (Japanese medaka): 100049520
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Entry
100049520 CDS
T02443
Name
(RefSeq) POU domain protein class V transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100049520
03021 Transcription machinery [BR:
ola03021
]
100049520
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
100049520
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
100049520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100049520
NCBI-ProteinID:
NP_001098339
UniProt:
Q6DVF4
LinkDB
All DBs
Position
12:15942115..15945185
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AA seq
469 aa
AA seq
DB search
MSDRPHSPGSKVRTYDFSRACNQVLDQESLGNSSSFHFSPMLTDPGLLYNKPTYGGITPA
STQGFFPFPHVTSDYRGSELQAGEFGQPKHWYPFAAPEYTGQVPGATAATQPSNLSPPIA
QTREQIKMPEIKIEKDTDEEYSTEMRVQQYPTSSAPMPHGVFYPAAWNPSLWPGITHIAP
PGSSNQLPTMSSIPSPSMSPSPPNNAAPGAPAFFGVNSSQGAAEPQAQNPTSTRSSGSSS
GGCSDSEEENLSTEELEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTTICRFEAL
QLSFKNMCKLKPLLQRWLDEAETSENPQDMYKIERVFADTRKRKRRTSLEGAVRSALEAY
FIKCPKPNTQEITHISDDLGLERDVVRVWFCNRRQKGKRLALPLDEEGDIQYYEQSASPL
NLAHSPITTQGYPPSGYPGAPPQLYMPQLHRPDVMKPGLHPGLVGHLTG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaggccgcacagccccgggtccaaagtccggacctacgacttcagccgggct
tgcaaccaggttttggatcaggaaagtttggggaactcttcgtctttccacttctctcct
atgctaacggatccgggcctgctctacaacaagcccacttatggcggcatcacgcccgca
tccacgcagggctttttcccgtttccccacgtcactagtgactaccggggatccgagctg
caggctggggagttcggccaaccgaagcattggtatccgttcgctgcgcccgagtacact
ggccaggtacccggcgcgactgcagccacccagccctctaacctcagccccccaatagcc
cagacccgagaacagatcaaaatgcccgaaatcaagattgagaaggacacggatgaggag
tattcaacggagatgagggttcagcagtaccccacgtcctctgcgcccatgccccatggg
gtcttctaccctgcggcctggaatccgtccttgtggcccgggatcacccacattgcgcca
cctggaagcagcaaccagctccccacgatgtcctccataccctccccatccatgtctcct
tcgcccccaaacaacgcggccccaggggccccggctttctttggcgtaaactcgtctcaa
ggagccgcggagccgcaagcgcagaacccgacctccacgcggagcagcgggtcatccagt
gggggctgcagcgactctgaggaggagaacctttcaacagaggagctggagcagttcgcg
aaggagctgaaacacaaaaggatcactttgggttttacgcaagcagatgttggccttgca
ttggggaatctatatggtaagatgttcagccagacaacaatttgccgctttgaggcttta
cagctgagcttcaagaacatgtgcaagctgaagccccttctccagagatggctagatgaa
gcagagacttcagaaaatccccaggacatgtacaaaattgagcgcgtatttgctgacacc
aggaagaggaagcggaggaccagtctggagggagcggtgcgttctgctctggaggcgtac
ttcatcaagtgccctaaaccaaatactcaggagatcacacacatatcagacgatctgggt
ttggagagagacgtggtgcgtgtttggttctgcaaccggagacaaaaaggaaagcgtttg
gccttgcccctagatgaggagggcgatatccagtactatgagcagagtgcgtctccactc
aacctggcacattctcccattaccactcaaggctacccaccgtctggatatcccggagcc
cccccacaactctacatgccccagcttcaccgacctgatgtaatgaaaccaggcctgcat
cctggactggtaggtcacctgacaggatga
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