Oryzias latipes (Japanese medaka): 100125533
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Entry
100125533 CDS
T02443
Name
(RefSeq) retinoic acid receptor RXR-gamma-B
KO
K08526
retinoid X receptor gamma
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03320
PPAR signaling pathway
ola04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
100125533
03320 PPAR signaling pathway
100125533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100125533
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ola03310
]
100125533
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
100125533
Nuclear receptors [BR:
ola03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
100125533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
100125533
NCBI-ProteinID:
XP_004068390
UniProt:
H2MQ65
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All DBs
Position
4:29488987..29526710
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AA seq
455 aa
AA seq
DB search
MDSSDPYLHLNSSGPMSAAHAHPPPPPMGGMVGHPSVISTSRPIQSPMSSLGLPMNGLAS
PYPVITSSLGSPSVSLQSTPSMNFRQLSSPQMNSMNSVSSSEDIKPPPGLQNLGNINYQC
TSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKECLIDKRQR
NRCQYCRYQKCLAMGMKREAVQEERQRGKERGENEVESTCSFNEEMPVDKILDAELAVEP
KTETYSDSSPGNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNE
LLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTEL
GCLRAIVLFNPDAKGLSNPSEVEALREKVYASLEAYTKQKYPDQPGRFAKLLLRLPALRS
IGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagtgatccatacttgcacctgaactcttcagggccgatgagtgcagcgcac
gcacatcctcctccccctcctatgggtggcatggtgggccacccatcggtcatcagcacc
tccaggccgatccagtcccccatgtccagcttgggcctgccgatgaacgggctggcctct
ccgtatcccgtcatcacgtcgtctctgggatcgccctctgtgtcgctgcagtccaccccc
agcatgaacttccgacagctcagcagtccacagatgaactctatgaacagtgtcagcagc
tccgaggacatcaagcctccgccgggcctgcagaacctggggaacatcaactaccagtgt
accagcccgggggggatgtcaaagcacatctgcgccatttgtggggatcgctcctcaggg
aagcactacggcgtgtacagctgcgaaggctgcaaaggcttcttcaagaggaccgtccgc
aaagatctcacctacacgtgtcgagacagcaaggagtgcctcatcgacaagcgccagcgg
aaccgctgtcagtactgtcgctaccagaagtgcctggctatgggcatgaagagagaagcg
gtgcaggaagaaaggcagcgtgggaaggagcgtggggagaacgaggttgagtcgacctgc
agtttcaacgaggagatgcccgtggacaagatcctggatgccgagctggctgtggagccc
aaaacagagacgtacagcgacagcagtcccgggaactcgaccaacgaccccgtcaccaat
atctgccaggcagctgacaagcagctcttcaccttggtggagtgggccaaaaggatcccg
cacttctctgatctccccctggatgaccaggtcatcttactacgagcaggctggaacgag
ctgctcatcgcctctttctcacatcgctcggtcacagttaaggacggcatcctgctggct
acggggctccacgtccacaggagcagcgcccacagcgccggagtcggatccatctttgac
agggttctgacagagttggtttcaaaaatgaaagacatgcagatggataagacggagctc
ggctgcctgcgagcgatcgtcctcttcaacccagatgcaaaagggttgtccaacccatca
gaggtggaggcgctaagggaaaaggtttatgcctcgttggaggcgtatacaaaacagaag
tacccagaccagccgggcaggtttgccaaactgctgctgcggctgcccgccctccgctcc
atcggcctcaagtgtctggagcatctgttcttcttcaagctaatcggtgacacgcctatc
gacaccttcctgatggagatgctggaagccccacatcagatcacatga
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