Oryzias latipes (Japanese medaka): 100125534
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Entry
100125534 CDS
T02443
Symbol
vegfc
Name
(RefSeq) vascular endothelial growth factor C precursor
KO
K05449
vascular endothelial growth factor C/D
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04010
MAPK signaling pathway
ola04020
Calcium signaling pathway
ola04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
100125534 (vegfc)
04020 Calcium signaling pathway
100125534 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100125534 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
100125534 (vegfc)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Growth factors (RTK binding)
100125534 (vegfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDGF
CXCXC
Motif
Other DBs
NCBI-GeneID:
100125534
NCBI-ProteinID:
NP_001265802
UniProt:
I7HGK1
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Position
1:complement(6566431..6646739)
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AA seq
399 aa
AA seq
DB search
MHLLGISLLLAYLLYSNLASDYYEDYEQEQMDEPDVSTEPDMEQKLRSASSVDELMTLIY
PSYWTALKCRSKLSAAAASKHSQRPQPHRLRPQADTEEPTYAAAFLNLDILKSIESEWRK
TQCMPREVCVDVGREFGAPTNVFYKPPCVSVYRCGGCCHSEDKQCRNISTGYLSKTVLFE
ITVPITQGTKPVTISVANHTQCSCLSKLDIYKQVHSIIRRALPECQLVNRTCPLGQSWSS
RQCRCVSMAASSPHNHSDIFSSDVCGPEKELDLESCQCVCQSGNPDCGPNKHFDKNTCQC
VCNVLSAASCPASHIFNKDTCQCTCSKTCPRHQPLNRSKCSCECNESPNKCFLKGRRFHQ
ASCSCLRPPCDVRRRKCERDFSFSEEVCRCVPSHWRRLN
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcacctactgggaatatctcttttactggcatatctgctttattccaacctcgccagc
gactattatgaagactacgagcaggagcagatggacgagccggatgtctcaacagaacct
gatatggagcaaaaactgcgctcagcctccagcgtggatgaactgatgactcttatttat
ccttcatactggactgctctgaaatgcagatcaaaactctctgccgctgctgcatcaaaa
cattcccagaggccgcagcctcaccgactgaggccgcaggcggatacagaagagccaaca
tacgctgccgcctttctcaacttggacatcttaaaaagtatagagtcggaatggaggaag
actcaatgcatgcccagagaagtgtgtgttgacgtgggcagggagtttggggctcccaca
aacgtcttctataagccaccctgtgtgtccgtctacagatgtggagggtgctgccactca
gaagataaacaatgcaggaatatctccactggttacctcagcaaaactgtactctttgaa
atcacagttccgatcacccaaggcaccaaaccggtgactatcagtgtggccaaccatacc
cagtgcagctgtctgtccaaactggacatctacaaacaagttcacagcatcatcaggaga
gccctgcctgagtgtcagcttgttaacaggacatgccctcttggtcaatcctggagttcc
aggcagtgtcggtgtgtcagcatggctgccagctctccacacaaccattcagacatattc
tcatcggacgtgtgcggtccagagaaggaactggatttggaaagctgtcagtgtgtgtgt
cagagtggaaatcctgactgtggtccaaataaacacttcgacaaaaacacctgccagtgc
gtttgcaatgtgctgtcggcggcgtcgtgccctgcgagccacatcttcaacaaggatacc
tgccaatgcacctgcagcaagacgtgtccgaggcaccagcctctcaacaggtcaaagtgc
tcctgtgaatgtaacgagtctccaaacaaatgcttcctaaagggaagaaggtttcaccaa
gcctcatgcagttgcctcaggcctccgtgcgacgtcagaaggcgaaaatgtgaacgagat
ttctctttcagtgaggaggtgtgtcgctgcgttccgtcccactggaggcggctaaactaa
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