Oryzias latipes (Japanese medaka): 100125535
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Entry
100125535 CDS
T02443
Name
(RefSeq) retinoic acid receptor gamma-A isoform X3
KO
K08529
retinoic acid receptor gamma
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100125535
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ola03310
]
100125535
Transcription factors [BR:
ola03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100125535
Nuclear receptors [BR:
ola03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
100125535
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF6939
Motif
Other DBs
NCBI-GeneID:
100125535
NCBI-ProteinID:
XP_004070508
UniProt:
H2LUS0
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All DBs
Position
7:12587582..12632040
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AA seq
502 aa
AA seq
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MFDCMEALGMGPHQLYDVTSRGACMLRKASPFFPRLDPFAWTSSASVQSVETQSTSSEEM
VPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYTCHRDKNCQ
INKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEEMVLPESYELSGELEELVNK
VSKAHQETFPSLCQLGKYTTNSSSDHRVQLDLGLWDKFSELSTKCIIKIVEFAKRLPGFT
TLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVF
AFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPEKVDKLQEPLLEALKIYARRRRPNK
PHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFEDQTEYNESQ
TPPPPPEPPAAPTLVVKQEVEDEDDNWGTENFSEPSPEEEDEDDEDDVGDEDRDRGSDSD
GEPWGVLDNLDGSRKGFVGRAQ
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggaggctctgggaatgggcccccatcagctctatgatgtcaccagt
cgtggggcatgcatgctgcgcaaggcgagccccttctttccgaggctggaccccttcgcc
tggacgagcagtgccagtgttcagtcggtggagacccagagtaccagctcagaggagatg
gtacccagctctccgtctccacctcctccacctcgtgtctacaaaccctgctttgtgtgt
caggacaagtcctcggggtaccactatggggttagctcctgtgagggctgcaagggtttc
ttccgtcgcagtatccagaaaaacatggtgtacacttgccatagagacaagaactgtcag
attaacaaagtcacacgcaaccgctgtcagtactgcaggctgcagaagtgcttcgaggtc
ggcatgtccaaggaagcagtacgtaacgatagaaacaaaaagaagaaggatgtcaaggag
gagatggtgcttcccgagagctatgagcttagtggagagctcgaggagttggtcaacaaa
gtcagcaaagctcaccaggaaaccttcccatcactttgccaacttggaaaatacacaact
aactccagctcagaccaccgtgttcagctggatctgggactttgggacaagttcagcgag
ctctccaccaaatgcatcattaagattgtggaatttgccaagcggctcccaggtttcacc
accctcaccatcgctgaccaaatcaccttactcaagtcagcctgcctggacattctgatg
ttaagaatttgcacacgctacaccccagaacaggataccatgaccttttctgatggcctg
accctgaacagaactcagatgcacaatgcaggctttggaccgcttacagacctggtgttt
gcctttgccggccagcttctccccttggagatggatgatacagaaacgggtctcctcagt
gccatctgtctaatctgtggagatcgcatggacctggaagagccagagaaagtggataag
cttcaagagcctctacttgaagctcttaagatctatgcccggcggcgccgccccaacaaa
ccccacatgtttccccggatgctgatgaagatcacagacctcagaggcatcagtactaaa
ggtgcagagagagcaatcactctgaagatggagatcccagggccaatgcctcctttgata
agagagatgcttgagaacccagaggccttcgaagaccaaacagagtacaacgagagccag
acgccccctccaccacctgaacccccagcagcaccaacactggttgtcaagcaggaggtc
gaggacgaagatgacaactggggcacagagaatttcagcgaaccatctccagaagaggag
gatgaagacgatgaagacgacgtgggagatgaagacagggacaggggctcggacagtgac
ggggagccctggggagttttggataacttggatgggtcgaggaaaggctttgttggcaga
gcgcagtga
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