Oryzias latipes (Japanese medaka): 100144361
Help
Entry
100144361 CDS
T02443
Symbol
scarb1
Name
(RefSeq) scavenger receptor class B member 1 isoform X2
KO
K13885
scavenger receptor class B, member 1
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03272
Virion - Hepatitis viruses
ola04145
Phagosome
ola04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100144361 (scarb1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
100144361 (scarb1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
100144361 (scarb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
100144361 (scarb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
100144361 (scarb1)
Membrane trafficking [BR:
ola04131
]
Endocytosis
Phagocytosis
Scavenger receptors
100144361 (scarb1)
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100144361 (scarb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
CxC5
PorA
Motif
Other DBs
NCBI-GeneID:
100144361
NCBI-ProteinID:
XP_004074525
UniProt:
H2L6Z6
LinkDB
All DBs
Position
12:complement(2320886..2338166)
Genome browser
AA seq
507 aa
AA seq
DB search
MAIDKAKVAIGFVAAGAVTLTFGLISAFTGPAMMRYQVGKNTMIDPKNDMSYTMWKDLPV
PFFMSVYFFNVLNPEEVLKGEKPMVEQRGPYVYRKRCQKENITFHPNYTVSYREYRTYYF
EPSMSVGNESDLVTVPNMLVLSAAVMMENLPYALRLLISATFKTFKEGPFLTKTVGELMW
GYDSKLVDFLNQYLPGMLPSSGKFGLFAEFNNSNTGLFTINTGKDDIRKVHRVDSWNGLT
QLSYWRTPQCNMINGTAGQMWPPFMTKESTLPFYSPDACRSLELVYQRTGEMLGIPLYRF
VAPRTMFANGSQYEPNQGFCPCRQSGLLNVSSCRHNSPVFISHPHFFNADPVLQDYVLGL
NPTEEEHGLFIDIHPLTGVPLNVSIRLQLNLYIKSVSGITETGKISEVVMPLLWFEESGY
IDGPVLNTFRTNLVVLPTVMEYMQYLLIALGLVTVVVASVVHHKVKRSSNPVEVFSVTEN
PGASAHGQVKGTHGYDTREKSLSAAEK
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccatcgataaagccaaagtagccatcggctttgtggcggcgggggccgtgacgctg
acgttcggacttatttctgccttcacgggaccggctatgatgaggtaccaggtcgggaag
aacacgatgatcgacccgaagaacgacatgtcctacaccatgtggaaggacctgcccgtg
cccttcttcatgtctgtctacttcttcaacgtcctgaaccctgaggaggtcctgaaagga
gagaagcccatggtggagcagaggggcccctatgtgtacaggaagcgctgccagaaagag
aacatcacgtttcaccccaactacacagtgtcctacagagaataccggacctactacttc
gagccgtccatgtctgtggggaacgagtctgacctggtcacggttcccaacatgctggtt
ctgagtgccgccgtgatgatggagaacctgccctacgccctgcgtctgctgatcagcgcc
accttcaagaccttcaaagagggtcccttcctgaccaagacggtgggggagctgatgtgg
ggctatgacagcaaactggtggacttcctaaaccagtacttgcccggcatgcttccctcc
tccgggaagtttggactcttcgccgagttcaataactccaacaccggcctgttcaccatc
aacacggggaaagacgacatcaggaaggtccacagagtcgactcctggaacggtttgacc
cagctgagctactggaggaccccccagtgcaacatgatcaacggcacagccggacagatg
tggcctcccttcatgaccaaagagagcaccttacccttctacagccccgacgcctgcaga
tccttggagctggtttaccagcgcacaggcgagatgctggggatccccctgtataggttc
gtggcgccaaggaccatgtttgccaacgggtcgcagtacgagcccaaccaggggttctgc
ccctgcaggcagtcgggtcttctgaacgtcagcagctgccgccacaactctccggtcttc
atctcccatccccacttcttcaacgccgacccagtgctgcaggactacgtgctgggtctg
aatcccaccgaggaggaacacggcctcttcatcgacatccacccgctgacgggcgttcct
ctgaacgtgtccatccgcctgcagctcaacctctacattaaaagcgtttcaggaatcact
gaaactggtaagatttctgaggtggtgatgccgctgctgtggttcgaggagagcggctac
atcgatggaccggtcctcaacacgttccgcaccaacctggtggtcctcccgaccgtcatg
gagtacatgcagtacctcctcatcgcgctcggcctcgtcaccgtcgtcgtggcgtccgtg
gtccatcacaaagtgaagaggtcttccaaccccgtggaggtcttcagtgtcacggaaaac
cccggggcctcggctcacgggcaggtaaagggcactcacggctatgacactcgggagaaa
agtttgagtgctgcagagaaatga
DBGET
integrated database retrieval system
