Oryzias latipes (Japanese medaka): 100144383
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Entry
100144383 CDS
T02443
Symbol
tdrd1
Name
(RefSeq) tudor domain-containing protein 1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
100144383 (tdrd1)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100144383 (tdrd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
SMN_Tudor
zf-MYND
Agenet
MYND_ZMYND11_ZMYD8
zf-HIT
Motif
Other DBs
NCBI-GeneID:
100144383
NCBI-ProteinID:
NP_001116401
UniProt:
A9CPT4
LinkDB
All DBs
Position
19:5466701..5484091
Genome browser
AA seq
1133 aa
AA seq
DB search
MNELRMPNLVRPNRPLREPASRPLTPSRFPVPSQPDAAYTGSAAGSTGLGSPGPAIMDGS
TSFGLVQPAPTAHFCHYCGQQGIFRCKGCKKTPYCSVDCQREDWKAHRHMCKSFDPETVG
ENMKESPDSDNVREDSLNIQRIYLKDLNATKYTKGAEIQGAVVEFNSPGRFFFLPEDPKV
MEALMSITAEXQKXPSSTVGTPYVPCVGEVCSVQFSXDLNWYRGLIQTLAADQKTAHVLY
IDYGNAENVPVERIKPLNIATKPYCPCAMECQXAGVVPIVDSWSTECCMTVRQLLGGKTL
TIKLVDTLKNGRVHTVDIQLSIGKQLSTFLLEQGYAFAEAAAVGSAPAKKDPSALLEASM
ENFKRCCEGKDINEWAQPPEPLTLTIGDRFSVVVSHFQSPTDFIVQKVENAGVIQDLQLK
LREHCSGVETQQDFRPAPGTVCCAQFSEDKQWYRAQVLAYSTEKSVCVGYIDFGNSEEVD
LNHLRPISPALLALPKQAISCILAGVQPVEDSWSEECISTMLRMIANKTVNVEIQSAHKG
KALVAIIEGEGYSEINVAELLISANYAAPADSNTLQQTEETTASAEPPASPPVCEPLVWS
CVELPSDGQTVVLSTSAVTSPAEFYCCVGPTTDHQVLMELGVQLKQHCQSDSTYFVPKVG
EPCCVKFSGDGKWYRAMVKELLGDVVKVNFVDFGHNMIVGKGCLRSITPKLLKLPFQAVR
CWLAGVKPAGSEWSSEALLWFQNLVDGAQLLARVVSVSQQGYGVELESGGQSVAAALVSQ
QFAKPSGNLSKDPVRSPTTKQEDLRGGDQSQALTPASNDTQAVCEDGKSEEEPSEVATFS
SAWKTAELPLNETFQPCVAAVINPTLFYLLHPIQNVDQQKLQEVMLELALHCSNYQSSSS
VDTRPVPGAACCAQFSVDKIWYRAIILEVGEAEMSVVYADYGNSEKVPVSQILPIPTRLL
QLPFKIIRCTLAGNEHFPVEWPPQVQQVFRSELLNVMATVQSFDGSANVLSLALPPERGG
RNLAAVIQEMLHVHRKGSPLPDASQTPGSDATEPSCIKLGSTTASPDEPEDAAEPADAVT
NTQESTPQEQKEMDQATSVHDLQGPGCCCQSLKKQMDRLEKMVQLLLSLQAEG
NT seq
3402 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagctgcgtatgccgaacttggttcgacccaatcggcctttgagagaacccgca
tccaggcccttgactccttcaaggtttcccgttcctagccagccagatgccgcatataca
ggctctgcagcagggtccactggacttggctctcctggaccagccatcatggatggcagt
acatcttttggattggtccagcctgcaccgactgcacacttttgccactactgtggccaa
caagggatttttcgatgtaaaggctgtaagaagaccccatattgctccgtggattgtcag
agagaagactggaaggcccaccgccatatgtgcaagtcttttgatccagagactgtagga
gaaaacatgaaagaaagtccagattcagataatgtgagagaggactcgctcaacattcag
agaatctatttgaaggacttgaatgctactaaatacactaaaggagcagaaatccagggt
gctgttgttgagttcaacagccctggaaggttcttctttcttcctgaagaccctaaggtg
atggaagctctaatgagcattacagcagagyttcaaaaaaamcccagctccactgtgggg
acaccttatgtaccgtgtgttggggaagtttgctcagttcagttctcctstgatttgaat
tggtacagaggtctcattcagactttggctgctgatcaaaagacagctcatgttctttac
atcgattatggaaatgcagaaaatgtcccagtggaaaggatcaaacccctgaatattgcc
actaagccatattgcccctgtgctatggagtgtcagrttgctggtgttgtgccaatagtt
gacagctggtcgacggagtgctgtatgaccgtgagacagctgctgggtggcaaaactctg
accatcaagctggtggacacactgaagaatggccgtgtccatacagtggacatccagctt
tccataggaaaacaactgagtacgttcctccttgagcaaggatatgcttttgcagaagca
gcagctgtcggttctgcaccagcaaagaaagacccaagtgccctactggaagcatctatg
gaaaacttcaagcgttgctgtgaggggaaagacatcaatgaatgggctcaaccccctgag
ccactcacactgaccattggagaccgcttctctgttgtggtcagtcatttccagtcaccc
accgactttattgtgcaaaaggtggaaaatgctggagtgatccaggatctgcagctgaag
ctgagggagcactgctccggggttgaaacccaacaggatttcagaccagctccaggcacc
gtttgttgcgctcagttctcagaggacaagcaatggtacagagcacaagttctggcttat
tccacagagaagagcgtctgtgttggatacattgactttggtaattctgaggaggtggac
ttgaaccacctgagacccatcagccctgctctactggctcttccaaagcaggcaatctcc
tgtatccttgcaggagtccagcctgttgaggacagctggtcagaggaatgcatttcaacc
atgctgcgaatgatagcaaacaaaacggtgaacgtagagatccagagtgcccacaaggga
aaggcgctagtggcgattatcgaaggagaaggttactctgaaatcaacgtggctgagctg
ctgatttctgcaaactacgcggctcctgctgactcaaacactcttcaacaaaccgaagag
accactgcttctgcagaaccacccgcatctcctcctgtgtgtgaacctctggtttggtct
tgtgttgagcttcccagtgatggccagacagtggtgctgtccactagtgctgtgacgagc
cctgcagagttctactgctgtgtcggccctaccactgatcatcaggtgttgatggagctt
ggggttcagttgaagcagcattgtcagtctgactccacatacttcgtgccgaaggttgga
gagccctgctgcgtcaaattttcaggtgacgggaaatggtaccgagccatggtgaaggaa
ctgttgggagatgtggtgaaagtgaactttgtggactttggtcataacatgattgtaggc
aaaggctgcctccgttcgattacacccaaactcctgaaacttccttttcaagccgttcgc
tgctggcttgcaggtgtgaagcccgcaggatcagagtggagcagtgaagccctgctttgg
tttcagaacctggtggacggtgcgcagcttttggcgcgggtcgtctccgtctcccagcag
gggtacggcgtggagctggagagcggagggcaaagtgtggcagctgccctggtttcccag
cagtttgccaaaccctctggaaacttgagcaaggatccagtgaggagccccacgaccaaa
caagaggatctaagagggggagatcagagccaggcattgactccagcaagtaatgacaca
caagctgtttgtgaggatggaaaaagtgaagaggagccttcagaggttgcaactttctca
tcggcttggaagacggcagaattgcctctgaatgagacctttcagccctgcgttgcagcg
gtcatcaatcccaccctgttctacctgcttcatcccatccaaaacgtggatcaacagaag
cttcaggaggtgatgttggagctggctcttcactgcagcaactatcagagctcgtcatct
gtggacaccagacctgttcctggagctgcctgctgtgcgcagttctctgtggacaagatt
tggtaccgtgccatcattttggaagttggtgaagctgagatgagtgttgtctatgccgac
tacggtaactctgagaaagtccccgtttcccaaatcttgccgattcccacgcgtctgttg
cagcttccttttaagatcattcgctgcacactcgctggaaatgagcattttccagtggaa
tggccacctcaagtgcagcaggtgtttcggtccgagctattgaacgtcatggcaaccgtg
cagtccttcgacggctctgctaacgtgctctccctggcattgccccctgagaggggtggg
aggaaccttgccgccgtgatccaggagatgctgcatgtccaccgtaagggcagccctctt
ccagacgcctctcagacgcctggcagcgatgcaacagaaccgagctgcatcaagctcggg
tcgacaactgcatccccagacgagccagaagatgcagctgagcctgctgatgcagtaacc
aacacccaggagtcgacgccccaggagcagaaggaaatggatcaggctacatctgtccat
gatcttcaaggccccggctgctgctgtcagagcctgaagaagcagatggacagactggag
aagatggttcagctgctgttaagtcttcaagcagaaggatga
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