KEGG   Oryzias latipes (Japanese medaka): 100192347
Entry
100192347         CDS       T02443                                 
Symbol
per1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
ola  Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:ola00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ola03400]
    100192347 (per1)
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    100192347 (per1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 100192347
NCBI-ProteinID: NP_001129992
UniProt: B3Y055
LinkDB
Position
18:complement(15127330..15144782)
AA seq 1406 aa
MSYDGCTSTPSSSTQGRVSGAHLKDQDGDPQGLSRQKADQPGPHGSPQERGHADDGVSSM
EGGSRSGDQRGPSSDEMEGMSSGNDSGERESHPRSCGHQSSRSSHSSSNGKDSGLMLESN
KSSNSQSLSPPGGSLAYSLLSTSSEHDPPSTSGCSSDQSARLQTQKELMKAIKELKLRLP
AERKGKGHSSTLSALKYALQCVRQVRANKEYYHQWSVEECHGCSLDLSAFTVEELDNITS
EYTLKNTDTFTMAVSFLSGRVVYVSPQGSSLLRCKPECLQGTIFSELLAPQDVSTFYSST
APCRLPPWASCIGSASPPADCTQEKSMFCRISADRVQGGEMRYYSFRLTPYQLTLRDSDA
AEPQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVG
TPILLYIHPEDRPTMVAIHEKIFQFAGQPFDYSPLRMCARNGEYLTIDTSWSSFVNPWSR
KVAFVIGRHKVRTSPLNEDVFTPQPGYETQVTTPDIVQLSEQIHRVLVQPVHSSSSQGYS
SLGSSGSRGSRRSQQHHHSASATSSSDSNGPAMEEAAAASYKPMTFQQICKDVHMVKTNG
QQVFIESRNRPPPRKHASTGATKAANSDPIRDLIADVTQPSKALVPAQLVQKDATTGYSY
QQINCLDSIVRYLESCNIPNTVKRKCGSSSCTASSTSDDDKQPDAGCSNKGGSVNLVGEP
PTLPPLTMAAKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPVVLAPPPPPPPPP
TARVLTPSAVTASTSTVGSIPPANAAVTPSVPASLPQTGQPERESWRGGGGGGRLGLTKE
VLSAHTQQEEQAFLDRFKDLSKLRVFDQTASLAARCHVPAAPPRGVRCSRDYPAAGGASA
HRRGRGAKRLKHQESSEQHAPLGVRGNRQDSRAGAAPMPLSMPMGAAANSSSWPSAGSQA
SMPPAAFAPGMFPFYPIYPPLQDLSRFPPTPTVPPMMALVVPNYMFPQMGAPISQPGFPP
GQFYNPNYTYFSPPPAPVSTVFNPMPTQGNYPPSQSSTAESCTPADREGADSPLFHSRCS
SPLNLLQLEESPINRLEVATALAASQQATPSAQGSVPAGGQNSANPRSSTDASKENGEAN
ESNQDAMSTSSDLLDLLLQEDSRSGTGSAASGSGSSGTRSSGSGSGSNGCSLSGTSGTSS
SQGSHTSKYFGSIDSSENDHSRKQPPGGGGSSSAGGDGGEEQFIKCVLQDPIWLLMANTD
DKVMMTYQLPVRDMETVLREDREALRNLQKHQPRFTDEQKKELSQVHPWVRTGRLPRAIN
ISGCAGCKCPPAMPPDAPFDVEIHEMELCTVLKAQEESFKKNRAADAHPEEEDDDEAEEK
EAEAHQAAVAEAQSLRSGTLERQGQT
NT seq 4221 nt   +upstreamnt  +downstreamnt
atgagttatgatggctgcacatcaacgcccagcagcagcactcaggggagagtgtcgggt
gcccacctcaaagaccaggacggagacccccagggcctgagccggcagaaggccgaccag
ccgggcccccatggctccccacaggagcggggacacgcagacgacggggtgtcgtccatg
gaaggagggtccaggtccggagaccagcggggaccgagctcggacgagatggaggggatg
tccagcgggaacgactccggcgagagggagagccacccgcgctcctgcggacaccagtcc
tcacggagctcccacagctcctcaaacgggaaggactccggcttgatgctggagagcaac
aagagctccaactctcagagcctgtccccccccgggggctccctggcctacagcctgctg
tccaccagctctgagcacgaccccccctccacctccggctgcagcagcgaccagtcggcg
aggctccagacgcagaaggagctcatgaaggccatcaaggagctgaagctccggctgccg
gccgagcgcaagggcaaaggtcactccagcactctgagcgcgctcaaatacgctctccag
tgcgtccgacaagtccgagccaataaggagtactaccaccagtggagtgtggaggagtgt
catggctgcagcctggacttgtctgccttcacggttgaagagctcgacaacatcacctca
gagtacaccctgaaaaacacggacaccttcaccatggccgtgtccttcctgtcggggaga
gtcgtgtacgtgtcgccgcagggctcgtccctgctgcgctgcaagcccgagtgtctgcag
gggactattttttccgagctcctggctccccaagacgtcagcaccttctacagcagcacg
gcgccctgccgcctgcccccctgggcttcctgcatcggctcggcctcccctcccgccgac
tgcactcaggagaagtccatgttctgtcggatcagcgccgaccgcgtacagggcggggaa
atgcgctactactccttccgcctgacgccctaccagctcaccctccgagattcggacgcc
gcagagccgcagccctgctgcctgctcatcgcagagagagtccactcaggatacgaagcc
ccccggatccccccggacaaaaggatcttcaccaccagccacactcccagctgcctcttc
caggaagttgacgagagagctgtgccgctgttgggttacctgccccaagacctggtgggg
accccaatcctgctctacatccacccggaggatcgacccaccatggtcgccatccacgaa
aagatctttcagttcgcagggcagccgtttgactattcacctttacggatgtgcgcccgc
aacggcgagtatctgaccatcgacaccagctggtcgtccttcgtgaatccctggagcaga
aaggtggctttcgtcatcggacgccacaaagtccgaacgagtcctctgaacgaagacgtg
ttcacgccacagccgggctacgagacccaggtcaccacgccggacatcgtccagctcagc
gagcagatccaccgtgtcctggtgcagccggtgcacagcagcagctcccagggttacagc
tcgctgggctccagcggctctcggggttcccgccgttcccagcagcaccaccacagtgcc
tccgcaacgtcgtccagcgacagcaacggccccgccatggaagaagctgcggccgcctca
tataaacccatgaccttccagcagatctgcaaagacgtccacatggtcaagactaacggg
cagcaggtcttcatcgagtcccggaaccgcccccctccccgaaaacacgccagcacaggt
gcaacaaaggccgccaacagcgacccaatcagagatctgatagcagacgtgacacaaccg
tccaaagctctggtccctgcacagctagtgcagaaggatgccaccaccgggtactcctac
cagcagatcaactgcctggacagcatagtcagatacctggagagctgtaacattccgaac
acggtcaaaaggaagtgcggctcctcctcttgcaccgcctcctccacgtccgacgacgac
aaacagccggacgccggctgcagcaacaaaggtggttcagttaaccttgtaggtgaacca
cctactctgcctcctctgaccatggcggccaaggcagagagtgtagcctcagttacgtct
cagtgtagcttcagcagcaccatcgtccatgtaggagacaagaaacctcccgagtcagat
atagtcatggaagaggctcctgtagttctggctcctcctcctcctcctcctcctcctccc
accgctcgtgtactgactccttccgctgtcacagcatccacctccacagtcggttccatc
ccccctgccaacgccgccgtgaccccctctgtcccggcctcccttccccagactggacag
ccagagagggagagctggagaggcggcggcggcggcggccgcttggggctgaccaaagag
gtgctgtcagcccacacccagcaggaggagcaggccttcctggaccgctttaaggacctg
agtaagctgcgggtcttcgaccagacggcgtctttggcggcgcgctgtcacgtccccgct
gctccgccgcgaggcgtgcgctgctctcgggactaccccgctgcagggggcgccagtgcc
caccggcgggggcggggcgcaaagaggctgaagcaccaggagtcgtcggagcagcacgcc
cctctgggtgtgaggggaaaccgccaggacagcagagccggcgccgcccccatgccgctc
tccatgcctatgggggcggctgcaaactcctcctcctggccctctgcgggctcccaggcc
agcatgccccccgccgcctttgccccaggaatgttccccttctaccccatctacccgccg
ctccaggatctgtctcgtttcccccccaccccgaccgtccctccaatgatggcgcttgtc
gtgcccaattacatgttcccccaaatgggggcgcccatatctcaacccggtttcccccca
ggacagttttacaaccccaactacacttatttcagcccccctccagcccccgtctccacc
gttttcaaccccatgcccacccagggcaactaccccccctcccaaagcagcacggccgag
tcctgcacgcccgccgaccgggaaggcgcagactcccccctcttccattcccgttgctcc
tcccccctcaacctcctgcagctggaggagtcgccaatcaaccggctcgaggttgccacg
gcgctggctgcctcccagcaagccacgccctctgcgcagggcagcgttccagccgggggg
cagaactcggccaacccgaggagctccacagatgcttccaaggagaacggggaggccaac
gagtccaaccaggacgccatgtccacctccagcgaccttctagacctgctgctgcaggaa
gactcccgctccggcaccggctctgctgcctccggatcagggtcctctggcaccagatct
tcaggttctggttccggctccaacggctgcagcttgtctggcaccagcggcaccagcagc
agccagggcagccacaccagcaaatactttggtagcatcgactcctccgagaacgaccac
tcccgcaagcagccaccagggggcggcggcagcagcagcgccggaggagatggcggcgaa
gagcagttcatcaagtgtgtgctgcaggatcccatctggctgctgatggccaacacggac
gacaaggtcatgatgacgtaccagctgcccgtcagggacatggagacggtgctgcgggag
gatcgcgaagccctgaggaacctgcagaaacaccagccccgcttcacggatgagcagaag
aaggagctgagtcaggtccacccttgggtcaggacgggccgcctcccccgagccatcaac
atttcgggctgcgccggctgcaagtgtcccccggcgatgccgcccgacgcccccttcgac
gtggagatccacgagatggagctgtgcacggtgctgaaggctcaggaggagagcttcaag
aagaaccgcgccgctgacgctcacccagaggaggaggacgacgacgaggcggaggagaag
gaggccgaagcgcatcaagctgcggtcgcagaggcacagagtttgagatcaggaacgttg
gagcgacaaggacagacttga

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