Oryzias latipes (Japanese medaka): 100301585
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Entry
100301585 CDS
T02443
Name
(RefSeq) cohesin subunit SA-2
KO
K06671
cohesin complex subunit SA-1/2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100301585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
100301585
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100301585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
100301585
NCBI-ProteinID:
XP_011478704
UniProt:
H2LVZ7
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All DBs
Position
10:22030977..22052484
Genome browser
AA seq
1272 aa
AA seq
DB search
MIAAPEIPTEFAYPQDTDTRFSSDTDFSEDFDGRSTTSAKGKGGKKGKKAIGDKGKGGKA
AGRINGHHQENGMENMMLFEVVKLGRSAMQSVVDDWIESYKHDRDAALLDLINFFIQCSG
CKGVVSAEMFRNMQNSEIIRRMTEEFDEDSGDYPLTIAGPQWKKFKSSFCEFISVLVRQC
QYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQR
QYEAERNKIVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDSIAEIRA
ICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNARLEL
FTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLNSTDEVLTPEDCESVYHLVYSAHRPVAV
AAGEFLYKKLFSQREPEEEGAPKRRGRQSPNANLIKTTVFFFLESELHEHAAYLVDSLWE
CGAELLKDWECMISLLLDDPLPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTGKR
VMTAKEKKTQLDDRTKITELFAVALPPLLAKYAVDAEKVTNLLLLPQFFDLEIYTTGRLE
KHLEALLRQIKEIVEKHTDTEVLEACSKTYHSLCNEEFTIFNRVDIARSQLLDELVDKFT
RLLEDFLREGEDADEDDAYQVLSTLKRITAFHNAHDLSGWDLFTSNFKLLNTGIENGDMP
EQIVIHSLQCTHYVILWQLAKLSEGSSRKDDLVTLRKQMRAFCMMCQRYLTNVNTAVKEQ
AFTILCDLLLIFSHQMVSGGREHLEPLVYSPEDSLQAELLTFILNHVFIDQDDDTNSTDG
QQDDEAVKIEALHKRRNLLAAYCKLIIYCVVEMKTGADIFKQYMRYYNDYGDIIKETMSK
TRQIDKIQCAKTLILSLQQLFNEMLSDLGHGFDRSSSAFCGIKELARRFSLTFGLDQVKT
RDAIAMLHKDGIEFAFKDPSPQGEGGPPLNLAFLDILSEFSSKLMRQDKRTVHMYLERFM
TFQMALQREDCWLPLISYRNSLQAGGDDDTMSVMSGYSSRGSSVRSKKIKPPVATVGTPA
PKRKLPEEESSSGEVWQQSMQTPVMMPSPHLTSTAMRDPKRSRDDGYMGVYPLPHEQPPP
HPHPQHHQQTPQHHQTPMDYNSQVTWMLTQRQQEEARQQQERAMNYAKLRSNLQHAIRRG
TGLMEEDEEPIVEDVMMSSEGRMDDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPAS
IMDESVLGVSMF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcaccagaaatcccaacagagttcgcctaccctcaggatacagacacaagg
ttctcctcagatactgacttttctgaggatttcgatggaagaagtacaacttcagctaag
ggaaagggggggaagaagggcaagaaagcaattggggataaaggcaaaggaggaaaggca
gcaggccgcataaatggccaccaccaagaaaacggcatggaaaacatgatgttgtttgag
gtcgtaaagctcggaaggagtgcaatgcagtctgttgttgatgactggattgagtcctac
aaacacgacagagatgcagcactgctagatctcatcaatttctttatccagtgctcggga
tgtaaaggtgtggtcagtgctgagatgtttcgcaacatgcagaactctgagatcatcaga
cgcatgacggaggaattcgacgaggacagtggtgattaccctcttactatagcagggccc
cagtggaagaagttcaaatccagcttttgtgaatttatctcagttctggtgcgccagtgt
cagtacagtatcatctatgatgaatacatgatggacacggtcatctctcttcttacggga
ctgtcagactcccaagtccgagccttcagacacacctcaacactggcggccatgaagctg
atgacggcgttggtgaatgtagctctcaacttaagcattaacatggataacacacagcgc
cagtacgaagcggagaggaataagatagttgcaaagagggccaatgacaggttggagctg
cttttgcaaaagcgcaaagagcttcaagaaaatcaagatgaaattgagaacatgatgaat
gcaatattcaaaggagtgtttgttcatcgatatcgggattcgatagcagaaatcagggcg
atctgcatagaggagatcggagtctggatgaaactttacagtgatgccttcctcaacgac
agctatctgaagtatgtgggatggacgatgcatgacaagcaaggcgaggtacgtctgaag
tgtctgacagctctgcagggtttgtactacaacagagaactcaatgccagactggagctc
ttcaccagtcgctttaaggaccggattgtctccatgactctggacaaagagtatgatgtt
gcagttcaggcgattaaactgctcactctggtcttgaacagtacggatgaggttctgacc
cctgaggactgtgagagcgtctatcatttggtgtactcggcgcacagacctgtagcggtg
gcagcgggggaattcctctataagaaattgttcagccagcgggaaccagaagaggaaggt
gcccccaaaagaagaggcagacaaagccccaacgccaacctcattaagaccactgtattt
ttcttcctggagagcgagctccatgagcacgcagcttaccttgtggactccctctgggaa
tgtggtgcagagctactgaaggactgggagtgtatgataagcttactcctggatgacccg
ttgccaggagaggaagctcttacagacagacaagagacggctttgattgagatcatgctg
tgcactgtacgccaggctgcagaatgccatccaccagttggaagaggaacagggaagagg
gtaatgacagcaaaggaaaagaagactcagctagatgaccgaaccaaaatcacggagtta
tttgctgtagctttgccccctcttctggccaagtatgcggttgacgcagaaaaggtgacc
aacttgttactgttgcctcaattctttgatctggaaatttacaccacgggtcgtttggag
aagcaccttgaagccctattgcgtcagatcaaggaaattgtggagaagcacacagacact
gaagttttggaggcctgctccaagacataccattccctctgcaatgaggagttcactatc
tttaacagggtggacatcgctcgctcgcagcttctggatgagcttgtggacaagttcacc
agactactggaagattttctacgggagggtgaagatgctgatgaagatgatgcttatcaa
gttttgtccactttaaagaggattacggcatttcacaatgcacatgacctttcgggatgg
gatctcttcaccagcaacttcaagctgctcaacacgggcatcgaaaacggagacatgcct
gagcagatagtcattcattcactgcagtgcacccactatgttatcctatggcagctggcc
aagttatccgagggcagctccagaaaggatgatctggtgaccctgagaaagcagatgagg
gcattctgtatgatgtgtcagcgctacctcaccaatgtcaacacagctgtcaaagagcag
gcattcacaatcctttgtgatcttctgctcatcttcagccaccaaatggtgtctggagga
agagaacacctggagccgttggtctattccccagaagactctttacaggcggaactgctc
accttcatcctcaaccacgtcttcatcgaccaggatgacgacacgaatagcaccgatgga
cagcaggatgatgaggcagtaaagattgaagctctgcacaagaggagaaacttgctggct
gcctactgcaaactcatcatctactgtgtggtagaaatgaagactggagcggacatcttt
aagcagtacatgaggtattacaacgattatggtgacataatcaaggagaccatgagtaaa
actcggcaaattgacaagattcaatgtgccaaaacgctcattctcagtctgcagcagcta
tttaatgaaatgctgtctgacctgggtcacgggttcgatcgctcctcctctgcattctgc
ggaatcaaagagttggctcgccgtttttcgctcacctttggtctcgaccaagtaaaaacc
agagacgccatcgccatgctacacaaggatggtattgagtttgcattcaaggatcccagc
ccacagggagaaggagggccacctcttaacctggctttcttggacatcctaagcgaattc
tcctccaaactgatgagacaagacaagaggactgtccacatgtacctggagcgcttcatg
actttccagatggctctgcagcgagaagactgctggcttccattgatctcctacaggaat
tccttgcaggctggtggcgatgacgacaccatgtctgtcatgagcggctattccagcaga
ggatcttctgtccgctccaagaaaattaagccccctgtggcaacagttggaactccagca
ccaaagaggaaactacccgaagaggagagcagcagcggggaggtttggcagcagagcatg
cagacccccgtcatgatgccttcccctcatctaacttccactgccatgcgggaccccaag
aggagtcgggacgacggatacatgggggtctaccccctgcctcacgagcagccgccgccc
cacccacaccctcagcaccatcagcaaacaccgcagcaccaccagacacccatggattac
aattcccaggtgacgtggatgctgactcagagacagcaggaagaggcgcgccagcagcaa
gaaagagccatgaactacgccaagctcaggtccaacctgcagcacgctattcggcgtggc
accggcctcatggaggaggatgaagagccgatcgtggaggacgtgatgatgtcatctgag
ggtcgcatggacgacctcaatgaaggcatggactttgataccatggacattgatttgcca
ccctccaagaaccgccgtgagagatctgagctgaagccagactactttgaccccgcttca
attatggatgaatcggtccttggggtgtccatgttttaa
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