Oryzias latipes (Japanese medaka): 100301588
Help
Entry
100301588 CDS
T02443
Symbol
piwil2
Name
(RefSeq) piwi-like protein 2
KO
K02156
aubergine
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ola03036
]
100301588 (piwil2)
Chromosome and associated proteins [BR:
ola03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
100301588 (piwil2)
piRNA pathway
100301588 (piwil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
Piwi_N
PAZ
ArgoL1
ArgoN
Motif
Other DBs
NCBI-GeneID:
100301588
NCBI-ProteinID:
NP_001153909
UniProt:
B9U224
LinkDB
All DBs
Position
13:27044937..27069845
Genome browser
AA seq
1034 aa
AA seq
DB search
MEPSKPPDISGMKVAGLPAFGRGLQLETVLGRSRGLPLAAETPSVGRARGVFTPGETVPG
PAPSLPTTVPVQGRGVLAQPESLVLGRARGVLLQKVEPKVGVARGSVLSSLQLQDEGASP
PETLLIPSGDTSASTTGVIGMPGLAQGSTLVSMFRGMGIEPLAPRGRGSQAVEAAGGMGD
MKPQGVRDSMERGSILSPIVGRGRAASPQLGMDRSHSSPPSLPVSPVSETPTDVMSQPPL
TGASSSVPTRQEATVTSSEEPMKAEPTVETESKPLNKAGVKGASITIGSNHIPISCKNQA
VYQYHVTFNPNVESMSMRFGMMRDHRSTTGEVIAFDGSILYLPVQLCDVVNLKSVRRTDD
EEIEITIKMTKVLPPNSDLCIPFYNVVFRRVMKIIGLRLVGRNHYDPENAVILGKQRLQV
WPGYSTAIKRMDGGLYLAVDVSHKVLRNDSVLDLMNTLYQQTKENFKDACTKELIGSIAI
TRYNNRTYRIDDIEWDKSPKDSFTLMDGTETTFLEYYSKNYGITVQETNQPLLVHRPKER
SNPGGKVISGHILLVPELSFLTGIPEKMKNDYRAMKDLKIHINVSSDQHTHAIKQLLKNI
SSKEDCTKALEGWGLELGSDVMMITGRMLPFETICLKSSSFATGANVSWSREVVNGASIS
SIPLNIWVVFYPRRSAEQAVELISTFHKVAGPIGLRLQRPITVELRDDRTETYVKSIHSQ
LTSEPHLQLVVCVIEGNRDDLYSAIKKLCCLKCPVPSQVINVRTISQQQKLRGIAQKILL
QLNSKLGGELWTVGIPLKSLMVVGVDVHHDTSKKHQSVMGFVASVNSSLTHWYSRVTFQT
PTEELISGFRACFLSTLQKYYELNHDLPQKIVVYRDGVSDGQLKMVELYEIPQLIKCFET
FPNYEPKLVFIVVQKRINTILYSSSANGFSSVPAGTVLDHTLTNKDWVDFYLTAHDIRQG
VGLPTHYVTLYNTANLTPDHLQRLTFKMCHLYWNWPGTIRVPAPCKYAHKLAFLSGQFLH
FEPAIQLSDKLFFL
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggagccaagcaagcctcctgacatcagtgggatgaaagtcgctggtcttcctgcgttt
ggcagaggactacagcttgagacggttttgggacgcagtagaggattaccgctcgctgct
gagacgcccagtgtaggacgagcccggggagtgttcaccccaggggagactgttccagga
ccagctccgtctctgcccacaactgtacctgtgcaaggtagaggagtgttggcacagccc
gagagtttggtattgggtcgggccagaggggttcttctacaaaaggttgagccaaaagtg
ggtgtggccagaggatctgttctgtcaagtctacaactacaggatgaaggcgcctctcct
cctgaaacactgctgattccatcaggagacacctcagcttccactacaggagtgattggt
atgccaggtcttgctcaagggtccacactcgtgtccatgtttagaggaatgggaattgag
ccattggcacctcgtggaagaggatcacaagcagttgaagcagctggaggcatgggggac
atgaaaccacagggtgtccgtgactcgatggagagaggcagcattttgtcccccattgtg
gggcgtggaagagcagcatcgccgcagcttgggatggacagaagtcattctagccctccc
agtttgccagtttcgccagtatctgaaacaccaacagacgtgatgtcacagccgcctctg
acaggagcttcatcgtctgtgcccactcgtcaagaggccactgtgacctcatctgaggag
ccaatgaaagctgagccgacagtggaaacagagagtaagccccttaataaagctggggtc
aaaggagcctccataactattggctccaaccacattccgatcagctgcaagaatcaagct
gtctatcagtatcatgtaacattcaatccaaatgtggaatcgatgagcatgaggtttggc
atgatgagagatcaccgctccaccacaggagaagtgattgcttttgatggctccattctg
tatctgccagttcaactctgcgacgtggtcaatctcaaaagtgtgagacggactgatgat
gaagaaatagaaatcacaatcaagatgacgaaggtgttgcctcccaactcagatctttgc
attccattctacaatgtggttttcaggagggtaatgaaaatcattggcctgaggctggtg
ggacggaatcattatgatccagagaatgcagtcattcttggaaaacaacgacttcaagtg
tggcctggctattcgaccgccattaagcgtatggatggaggtctgtacctcgctgtggac
gtgtcccacaaggtgctgcggaatgactcggttcttgacctcatgaacaccttgtatcaa
cagacaaaagagaacttcaaagacgcgtgcactaaagagctcatcggtagcatcgccatc
acccgatacaacaatcgcacgtaccgcattgatgacattgagtgggacaagtcacccaag
gatagtttcacattaatggacggcacagagaccacgtttttggagtactacagcaagaac
tatggaatcacagttcaagagacaaaccagccgttactcgtgcatcgaccaaaggagaga
tccaaccctggaggcaaggtcatttctggccacatcctcctagtgccggagctgtccttc
ctgacgggaatcccagaaaaaatgaaaaacgactatagggcaatgaaagacttaaaaatt
cacatcaatgtgagtagtgatcagcacacccatgcaatcaagcagcttctgaagaacatt
tcatccaaagaggactgtacgaaagcgctggaaggatggggactggagctcggctcagat
gttatgatgatcacaggtagaatgctcccttttgaaaccatctgtcttaagtcctcctcc
tttgctactggtgccaatgtgtcctggtcaagagaggttgtaaatggtgcttcaatcagc
tctatccctttgaacatctgggtmgttttctaccctcgccgaagtgctgaacaggcagtc
gagctcatttctacctttcacaaagtggctggtcctatcggactgcggctgcagcgacca
atcacggtggagctgcgagacgatcggaccgaaacttatgtcaagagcatccattctcaa
ctcaccagtgagcctcaccttcagcttgtagtgtgcgtcattgaaggcaacagggacgat
ctctacagtgccatcaagaagttgtgctgcctcaaatgccccgtcccttcccaggtcatc
aatgttcggacaatatctcaacaacaaaagttgagaggcattgcccagaagatccttctc
cagttgaactctaagttgggtggagagttgtggactgtcggcattccactaaaaagcttg
atggtggttggagttgatgtccaccatgacaccagcaaaaagcatcagtctgtcatggga
tttgttgcaagtgtgaacagttcactgacccactggtattccagagtgactttccagacg
cccactgaggaactgatcagtggcttcagagcctgcttcctgtccactttgcagaagtat
tatgagctaaatcatgacttgccacagaagattgtggtttaccgagatggcgtgtctgac
ggtcagctgaagatggtggagctttacgagataccacagctgatcaagtgctttgagacc
ttccccaactatgagcccaagctggtcttcatcgtggtccaaaagcgcatcaacaccatc
ctttattcatcttctgcgaatggcttcagctctgtcccagcgggaacagttctcgatcac
accctcaccaacaaagactgggtggacttctatctgacggcacacgacatcagacaaggc
gtcggactccccactcattatgtcacactgtacaacacagccaacctcactccagaccac
ttgcaaagattgacttttaaaatgtgccacctgtactggaactggcccggcaccatcaga
gttccagcaccatgcaagtatgcacacaaactggcattcctgtcgggtcagttcctgcac
tttgagccagccatccagctttcagacaagctctttttcttgtga
DBGET
integrated database retrieval system