Oryzias latipes (Japanese medaka): 100302007 Help Entry 100302007         CDS       T02443                                  Symbol rttn Name (RefSeq) rotatin isoform X1   KO K16484   rotatin Organism ola  Oryzias latipes (Japanese medaka) Brite KEGG Orthology (KO) [BR:ola00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ola03037]     100302007 (rttn) Cilium and associated proteins [BR:ola03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    100302007 (rttn) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N TPR_Trm732_C Motif Other DBs NCBI-GeneID:  100302007 NCBI-ProteinID:  XP_004081295 LinkDB All DBs Position 20:15878668..15909513 Genome browser AA seq 2225 aa AA seqDB search MELSSLIKKIGHSLVEIRVRALKNILCKLDHSLISVNDIVQEKMLFVYLLEWFNFPEVPM KEEVLGLLLTLSRHPSAAQMLRDVGAVDFLTSLSPNLEPRLRTVIDGTLDQLFQLPELLP SHSAVYSHGAHCTTPTVVSADENIPTTGYFHKGKPSNIEVPPKKIAVNESVRCLKFSVFP WLALTNTDRHILSSNESSLGSTNPNLVRTTCELLCDVIMQDFPAEIFLQRPGIVKNLLSL LRLSSCKGEVNYLRSPALSCLRQLCVGLRRRLRFHQDPGFCSAKQDAVSQNSSLSYTQEV QGNQRSHASSPATERSPRPSVLGRRERARGDGQDGDAASDSGSSQRGGVAVQISNSPEHV AQLELPDLGAEDTLELQLQQLTLAQFTVTTLQHAIPLLKTEGLHMFHRVLELLCDAVLLL GDSVCELVWDDHSLVGMELKETLQTCMELLSDILSYHQNSSADIPPSSQINHRMAYIGTA AFTIKFLQTVLPPEKASSNLQDNMATAIFHLSLDTSFGSLLPSMQEAAVAYLEQVNVDNH DVYRRVTRAALWMESTCSFIKETQAEGEKNWLELLELADQATDGLPFHLHLPIIKHCVLM CSYLWRFDQPSPFLQTESQKLLLKMLSHPLLAVKIEAYERTLNLVKDCLGIQNVSRQEPA ACAAVNFLLHHRVLYEISTFGLQDSAEKVSLAAKDILLFLLKGRLMMTASAWARFTEALH PVIPILQGYANTEESLGNCVLLISDTSDAGVLSNTAKLKAALRLLFSKKPTVRMAAVQQI LPHITSGEDASTSRPDMDQSVIASLPNIFCGKNLVDVTLDTRSKSLLKVESVEKLFHLLS SDSVDISLKRSAAEQLSVVLQDTTMHPVLKSLGITDKVVSLMMGSVHGNKSFDCLLEPCA CILRKLVYADPSLRHSLAQRNLLLLWLLRASLILKENKGNGSEIAVLMTLLLFDEIASSE MWLEKANTDVKISPFSLPLTAARSHNIPFQAATHHAVSPYRCLPAPSDDLLALIPARQAL QVAWNTAWHSGINNLLEKLHGVASDANEFNPDLKLSESQLLSVRVAHLPSALRDCVQAIA TAAGHRSVASGLSGLSLYLLIDRLALPHVPTYNCRDTLQSLSWHTALARFLQVRPACIED ERLLVGIVTFLNAYFKRVHAEFVPDEEDRDLRWILELLLNQETAVLLHLLHGVETQSSNQ STEQPEELKNRMSQTLQRELISFFNTLLLRLSHTTDRLCLASAGLFKSQLAVRLLQSLRV SDAPRFYGLPSLERTLQGMVSLTAQPGWSSHCPDLEPSSLCSKYLSGLLEVISSFYVEWG GNSLSFMGKGVTKNAVICLLHLSHEMMTENKEKDSIPLWYLGSERTTEDAGASPLGLAWL IPLWVDRDQEVRFASLGLGAALSSVASGCQALCRSCQNISGGLWGTLLNILLDQQETSMV RREAAFILQNLLVMPMPANAEEAKNSHWQHPCVHDEVSGISLVGLPALQALLHHCQYFQN VAFSATTCYRGRHTFHLPPCFDEPSGPGLKSDVSGDSESSLWFWRCDPPTDSRRPSSSLS TFSTVIKGSGSHTPNISSAVSIADEPPACRLTAQGQSDTDTSNSVTSQESQLSAVEATLI VTPDLLTAHCGVLTNLLAILPDFVLTAIRQNQLLHLLANLVDVGLIEKCLTELRMPNVLP GQREDIKTQLVTALQFLSGFSKLLQLCILADKELIGQMEVMKQLLSALVAVLMLDVKGLD AGIRLVVCACWHDVFTLLTALLKRNGSAIHPSVSAALARRWRSFAGTLSECMNEKYADHH LHTVALQFLSTVFTEETNRRTEAIPNSEHSSPLSDILNGPLANQLCESLLQSFEKRSLRD PLKKLTGRALMTLLTCSPSAQNFASKAGLIDSCVEQLKQSYSQLESVRPGKVSLHKKEAV YLKEVKLTVEILRSALYCNDESKTAATDARLSQAVHGLWPWLLLDDPTMEAALEALCVYT ANCTTACSALCGSGPGVVPGVKGSSSSSNSSLMHSVMKLTSLSSNGPIQNLAFFLLANLV ASRDCRGILQKNNFLQVFLSVPVPKAPGVKATPAGGSGSLLGLWLRLLVSLSSAEDGQQS ILKVTGSLEMLADLATHRRHALLILHNLCFCSANKSHVLTSDKAVNVLLSCLDSKDIEAR CIGASALWALLHNNQRAKTSLKCPTVRLKIEEAHAISKKDAEAKPEAFRLHLLKCLENLS QLLKN NT seq 6678 nt NT seq  +upstreamnt  +downstreamnt atggagttatcttccctgattaaaaaaattggtcactcactggtagaaataagagttaga gctctgaagaacatcctgtgtaaactggaccattctttgatttctgtaaatgacatcgtc caagaaaagatgctgtttgtgtatcttctggagtggttcaactttccagaggtgccaatg aaggaagaagtgcttgggctgcttttaactttatcaaggcatcccagtgcagcccagatg ctgagagacgttggggcggtagactttctcacttcgctatctcctaatctggagcccaga ctgcgaactgtcatcgatggaaccctggaccagctgtttcagcttcctgagctgctcccc agtcattcagctgtctactcacatggagctcactgtacaactccaacagttgtctcagca gatgaaaacatacccacaacaggttattttcacaaaggcaagcccagcaacatagaagtg ccacccaagaagatagcagtaaatgaatcagtgagatgtctgaagttctcggtgtttcct tggctggcactgacaaacacagacaggcacatactttcgtctaacgagagctctctgggg agcactaatcctaacttggtgcgaaccacatgtgaacttctgtgtgatgttattatgcag gactttcctgcagagattttccttcaaagacctggaattgtgaagaaccttttgtctctt ctgcggctgagttcgtgtaaaggtgaggtgaactaccttcgctcgcctgctctttcctgc ctgcggcagctttgcgtggggctgaggaggagactgcgttttcaccaagatcccggcttc tgctctgcaaagcaagatgcggtgtcgcagaattcgtccttgtcttacacccaggaggtt cagggtaaccagcgttctcatgcgtcctcacctgcgaccgagcgttctcctcgaccttct gtgttgggccgcagagagagagccaggggagatggccaagatggagacgcagcctcagac agcggcagctcacagagaggtggagtggcagtccaaatatctaattcccctgaacatgtg gcccaattggagcttcctgacctgggtgcagaagataccttggagctgcagttacaacag ctcaccttggctcagtttactgttaccacactgcagcacgccataccactgctgaagaca gaaggtttgcacatgttccaccgtgttctggagctgctgtgcgacgccgtcctcctgctc ggggacagcgtgtgcgagctggtctgggacgatcacagcctggtggggatggagctgaaa gaaacactgcagacctgcatggagctgctgagtgatattctcagctatcaccagaactct tctgcagacattcctcccagttcccagataaaccacagaatggcctacataggtactgcc gcattcaccattaaattcctacagactgttctccctcctgagaaggctagcagcaatctt caagataacatggcaactgcaattttccacttaagcttggacacatcatttggcagttta ttaccaagcatgcaggaagcagctgttgcctacttggagcaggtgaacgtagacaaccat gatgtctacaggagggtaaccagagctgctctctggatggaatcaacctgcagctttatc aaggaaacacaagctgagggagagaagaactggttggagctactggaattggcagatcaa gctacagacggacttccatttcacttgcacctgcctatcattaaacactgcgttctcatg tgctcctacctgtggagatttgatcaacccagtccattccttcagactgagagccagaag cttcttctgaagatgctgtctcatcctttactggctgtcaagatcgaagcgtatgaacgt actttgaacctggtcaaggactgccttggcatccagaatgtgtcacgacaggaaccggca gcgtgcgccgccgttaacttcctccttcaccacagggtgctttatgaaattagcactttt ggacttcaagactctgcagaaaaagtgagcttggctgccaaggatatcctgctattcctg ctcaagggacgattgatgatgacagcatcagcctgggccagattcactgaggcacttcac ccggtcatacccatattacagggctacgccaacactgaagagtcacttggaaactgtgtc ctgctgataagtgacacgtcggatgcgggcgtgctttcaaacacagccaagctaaaagca gcgctccgactgcttttttctaaaaaacccacagtaagaatggcagcagtgcagcagatt cttccacacatcaccagcggtgaagatgcaagcacctccagaccggacatggatcaatca gtgattgcatctcttcctaacattttctgtgggaaaaaccttgtggatgtcacacttgac acccgcagcaagtctttactaaaggtggagtcggtggagaagctgttccatctcctgtcc tcagactcggttgacatctccctaaaaagatcagctgcggaacagctgtctgttgtgctg caagacacaacaatgcacccagtgctgaagagtctcggcataacagataaagtcgtttct ctcatgatggggagtgtacacggcaacaagagcttcgattgtctgctggagccgtgtgcg tgcatcttgagaaaactggtgtacgccgatccgtctctaaggcacagcctggcgcaacgc aacctcctgctcctctggcttctcagggcttcgttaatattgaaggagaacaaaggcaat ggaagtgaaatcgctgtcctgatgactttgctgctctttgatgaaatcgccagcagtgaa atgtggttagaaaaagccaacacagatgtgaaaatctcgccattttccctaccgctgaca gcagcacgcagccacaacatcccctttcaggcagcgactcatcacgctgtgagcccatac cgctgcctcccggctccctccgacgacctcctagccctcattcctgccaggcaagccttg caggtggcctggaacaccgcatggcattctgggataaataacctccttgaaaagctgcac ggtgttgcaagcgatgctaacgaatttaatcccgatttaaagctgtcggagtctcagctt ttgtcagtgcgggtggcacaccttccctctgctctgcgggactgcgtccaggccatcgcc accgcagccgggcacagatcggtggcctctggcctcagcgggctcagcctttacctgttg attgacagacttgcgcttcctcatgttcctacatataactgcagggacaccctgcaatcc ctcagctggcacacggcgttggccaggtttctgcaggtgcgaccagcctgcatcgaggat gaaaggttgctggtgggaattgtgacatttttgaacgcctacttcaaaagggttcacgcc gagtttgtgcctgacgaagaagacagagacctacgctggatcctggagctgcttcttaac caagaaactgcagttctccttcatttgcttcatggcgtggagacgcagagctcaaaccag agtaccgagcagccggaggaactaaagaaccggatgagccaaacactacagagagaactc atcagcttcttcaacaccctgctgctcagactgtcgcacaccactgacaggttgtgtttg gcgtcagccggcctcttcaaaagccaactggcggtccgcttgctgcagagcctgcgggtg tccgatgccccacgtttctatggccttcccagcctggagaggacactgcagggcatggtc agcctgactgcccaacctggctggagctcccactgccctgacctggagcccagctccctc tgctccaagtatctcagtggattattagaggttatctcctccttttatgttgagtggggc ggtaactcgctgtctttcatgggaaaaggtgtaaccaagaatgctgtcatctgcttgctg catctatcccacgagatgatgactgaaaacaaagagaaggactcgattcctctgtggtat ttgggaagtgagcggacgactgaggatgctggagcctctccgctgggattggcctggcta attccactctgggtggaccgagatcaagaggtgaggtttgccagtttgggtttaggagct gctctgtcctctgtggccagtggatgccaggctctgtgtcgcagctgtcagaacatcagc ggcggtctgtggggcacgctgctcaacatcctcctggaccagcaggagaccagcatggtc cgcagagaggctgcatttatcttgcagaacttgctggtgatgcccatgcctgccaacgca gaggaggccaagaactcacactggcagcacccatgtgttcacgatgaagtgtccggtatc tctctggtgggtcttcccgctctgcaggctctgctccaccactgtcagtacttccaaaat gtcgctttttctgccaccacttgttaccggggcagacacacttttcaccttcccccttgt tttgacgagcccagtgggcccggtctaaagagtgacgtgtcaggtgattctgaaagttct ttatggttttggagatgtgacccccccaccgactcgagaagaccttccagctctctgtct accttcagcactgtgataaaaggttcagggtcccacactcctaacatttcctctgctgta agcatcgctgatgaacctcctgcctgcagactgacggctcaaggccagagtgatacagac acaagcaactcagtgacctcacaggaatcccagctgtcagccgtggaagccaccctcatt gttacccctgaccttctgacggcgcactgtggggttctgaccaatctgctggccatcctg ccagatttcgtcctcaccgccatcagacagaaccagctcctccacctgttagccaatctg gtggatgttggacttatagagaagtgcctgactgaactgaggatgccgaatgtccttcct ggacagcgggaagacataaagacccagttggtgactgctcttcagttcctctctggattt tccaaactcctgcagttgtgcatccttgcagacaaagagctgattggccagatggaggtc atgaaacagctgttatctgctttagtggctgttctcatgctggatgtgaaaggattagat gcaggtattcggcttgtggtttgtgcgtgctggcatgacgtcttcacactcctaacagct ctgctgaagaggaacggctctgcaatacacccatctgtctctgctgctctggcgagacgc tggcgctcatttgcaggaacattatcagagtgcatgaatgagaagtatgcagaccaccat ctccacacagtggctctgcagttcctttctacagttttcacagaagagacgaaccgccgc actgaagcaatcccaaactctgaacacagctccccgctgtcagatatcttaaatggacct ctggccaaccagctgtgtgagtcgttactacagagctttgagaagcggagccttcgggac cctttgaagaagctgactggtcgcgccctgatgacactgctcacctgcagtccctctgcc caaaattttgcctccaaagctggtttgattgacagctgtgtagagcagctgaagcagagt tattcccaactggaatccgtccgacctggcaaggtgtccctccataaaaaggaagcggtc tatttaaaggaagtgaagctgactgtggagatcctgcggagtgcactttactgcaatgat gaaagcaaaacggccgccacagacgctcgcctgtctcaggccgtgcatggtctctggcct tggctcctgctggatgaccccaccatggaagcagcactggaggctttgtgtgtctataca gccaactgcacaacagcatgcagtgctctctgtggcagcggccccggtgtagtgccaggt gtcaaaggctcctcctcttcctccaacagctctctgatgcacagcgtcatgaagctgacc tcgctctcctcaaacggtcccatccagaacctcgctttctttctcctcgctaacctggtt gcgtcacgtgactgcagaggcatcctgcagaagaataatttccttcaggttttcctgtcc gtgccggtgccaaaggctcctggtgtaaaggccacgccagcaggcgggagtgggagcctc ttgggtttgtggttgagactgctggtcagcctctcgtctgctgaagacggccagcagagc atcctgaaggtgactggaagcctggaaatgctggcagacctggcaacgcatcgccgacac gctctgctcatcctccacaacctctgcttctgctctgcaaacaagtcacatgtcctcacc agtgataaagctgtgaacgtcctgctgtcctgcctggacagtaaagatatagaagctcgc tgcattggagcatctgcactgtgggctttactacacaacaaccagagggcaaagacttcc ctcaagtgtccaactgttcggttgaaaatcgaggaggcccacgccatctctaagaaagat gcagaagccaaacctgaagcgttcagactccacctgctgaagtgcctggaaaacctttct cagttacttaaaaactga

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