Oryzias latipes (Japanese medaka): 100302425
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Entry
100302425 CDS
T02443
Symbol
lefty1
Name
(RefSeq) left-right determination factor 1 precursor
KO
K04668
left-right determination factor
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
100302425 (lefty1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ola04052
]
100302425 (lefty1)
Cytokines and neuropeptides [BR:
ola04052
]
Cytokines
Transforming growth factors (RSTK binding)
100302425 (lefty1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
XAF1_C
BetaGal_ABD2
Motif
Other DBs
NCBI-GeneID:
100302425
NCBI-ProteinID:
NP_001156562
UniProt:
A2TJL5
LinkDB
All DBs
Position
24:13233386..13234982
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AA seq
358 aa
AA seq
DB search
MDMLRACVLCAALLSLSKAFTHQDMKDALLQKLGLDEVPKIQKRDLENLVVPAHIRNKYV
SMLKMHHSRKRRSLPSLAGILRGIPGNADISGEFVYSDTTRHRMLFDMEARIPDNSEVTM
AELKLFQRASHQKRFTVERKAHRAVNNARVSIYWVEVLPDGSNRSSLVDSRLIPIHESGW
KSFDVTQAVHYWSKTQQKTPMHLEVWIEGERPGSYAAEVAKSVRFTTQEQTEHTSGKPEL
VLYTLNLEEYGSRGDCDVYQSKDTCCREQYFIDFRALTWTQYWIIEPAGYQAFRCTGGCK
QPKRNFGYGERRCTVSVSAPLPIMYLVKKGDYTEIEVAEFPNMIVERCACTLDNTSIA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggatatgctccgcgcttgcgtcctgtgcgccgctctcctcagcctctccaaggctttt
acgcaccaggatatgaaggatgcgctcctgcagaaactcgggctggatgaagttcctaaa
atccaaaagagggatttggagaacctggttgttccagctcatatccgaaataagtatgtg
tccatgctgaagatgcaccacagcaggaagcgcaggtctttgcccagtctggctggcatt
ctgagaggaatccctggcaatgcagacatctccggggagtttgtgtactctgacacgact
cggcatcgcatgttgttcgacatggaggcgcggatcccggacaacagcgaagtgaccatg
gcggagctgaagctgttccagcgggcctcgcatcagaagcgattcacggtggagaggaag
gcccaccgcgccgtgaacaacgcccgggtcagcatatactgggtggaggttctgcctgat
ggatccaaccgatcatctctggtggactcacggttgattcccattcacgagtctggctgg
aagagctttgatgtcacccaagcggtgcactattggtccaagacgcagcagaagacgcca
atgcacctggaggtgtggatcgagggcgagagacctggcagctatgcggcagaggtggcc
aagagtgtgcgctttaccacccaagagcagactgagcacacctcggggaagcctgagctc
gtcctctacaccctcaacctcgaggagtatggctctcgcggggactgcgatgtataccag
agcaaagacacctgctgcagggagcagtacttcatcgacttccgggcgctcacttggacc
cagtactggatcattgaacccgccgggtaccaggctttccggtgcacggggggctgcaag
cagcctaaacgcaacttcggctacggggagcgaaggtgcacggtgtcggtgagcgctccg
ctccccatcatgtacctggtaaagaaaggagactacactgaaatcgaagtggccgagttc
cccaacatgattgtggagaggtgcgcatgcactctggacaatacctccatagcatga
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