Oryzias latipes (Japanese medaka): 100304450
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Entry
100304450 CDS
T02443
Symbol
sox7
Name
(RefSeq) transcription factor SOX-7
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100304450 (sox7)
Transcription factors [BR:
ola03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100304450 (sox7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
YABBY
Ccdc124
Motif
Other DBs
NCBI-GeneID:
100304450
NCBI-ProteinID:
NP_001158341
UniProt:
C3VV11
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All DBs
Position
24:complement(13926865..13929645)
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AA seq
397 aa
AA seq
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MAALISAYSSWPESFECSPEDGDGPDGHGSHRTTVDKAPEPRIRRPMNAFMVWAKDERKR
LAVQNPDLHNAELSKMLGKSWKALTPPQKRPYVEEAERLRVQHMQDYPNYKYRPRRKKQL
KRICKRVDPGFLLSGLAPEHSTLPEQRALCHPLDKDEGSPNKISGGFSGPSTVLPSVRTF
REPAGSNSSFDTYPYGLPTPPEMSPLDAMDHEHVPPTYYSASASCPDEHHQNQTHMGSPP
PYHTDYTQSQLHCGGTHLGHMPHMSQIGGSGGPIHGPPISYYSSSTFAQIHHGLHQGHLG
QLSPPPETQGHLETLDQLSQAELLGEVDRNEFDQYLNSNGSGFHPEQGSSMTVTGHIQVA
SAAPPCSSSSSSSSTETSLISVLADATAAYYNNYGIS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctcatcagcgcgtactcgtcgtggccggagtccttcgaatgttctccagaa
gacggagatgggcctgatgggcacggatcgcacaggacaaccgtggacaaggcgccggag
ccgcggatccgacggccgatgaacgcgttcatggtctgggccaaagatgagcgcaaacgt
ctggcggttcaaaaccctgacctgcacaatgccgagctcagcaaaatgttaggaaagtca
tggaaggcccttactcctcctcagaagaggccctatgtggaggaggcagaaaggctgcgg
gtgcagcacatgcaggactaccccaactacaagtaccggcctcgccggaagaaacagcta
aaacgtatttgcaagagagtggatcctggcttcctcctgagcgggctggctccggaacac
agcaccctgccggagcagcgggccctttgtcaccccctcgacaaagatgagggcagcccc
aacaaaatcagcggtgggttttccggtccgagcactgttcttcccagcgtcagaaccttc
agagaacctgctggctctaacagcagcttcgacacatacccgtacggcctgccaactcct
cctgagatgtcccctttagacgccatggaccatgagcatgtgccccccacctattactca
gcgtctgcctcctgtccagacgaacatcaccagaatcagacacatatgggcagcccacct
ccctaccacactgactacacccagagccaactccactgtgggggcacacatttgggtcac
atgcctcacatgtctcaaattggaggtagtggtggaccaatccatgggcctcccatttct
tactacagctcttcaacttttgcccaaattcaccacgggctccatcaaggccacctgggt
cagctgtcccccccaccagagactcagggtcacctggagactttagatcagctgagccag
gccgaacttttgggtgaggtggaccgcaatgagttcgaccagtacctgaactccaatggg
agcggcttccacccggaacagggcagcagcatgactgtaacgggacacatccaggtagca
tcagctgcacccccgtgttccagcagcagcagcagcagcagtacagaaaccagcctcatc
tctgtgctcgcagatgcaactgctgcctactacaacaactacggcatttcgtaa
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