Oryzias latipes (Japanese medaka): 100304457
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Entry
100304457 CDS
T02443
Name
(RefSeq) transcription factor Sox-17-alpha-A
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100304457
Transcription factors [BR:
ola03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100304457
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Chlor_dismutase
AmyB_C
TFIIIC_sub6
Motif
Other DBs
NCBI-GeneID:
100304457
NCBI-ProteinID:
XP_004081359
LinkDB
All DBs
Position
20:20605138..20606720
Genome browser
AA seq
305 aa
AA seq
DB search
MRFSHDLAHLQPRANMFESEEPGAAEREQMSDLRSPGSRPSSPMSVNSDSSCNSPEPKSA
STQRVRRPLNAFIIWTKEERRRLAQLNPDLENTDLSKILGKTWKAMSLAEKRPYMQEAER
LRVQHTIDYPNYKYRPRRRKQLKKGAKAQTSEASSGFGIPYNLTYLLQNQQQNAPSFSHV
PMHGAYTDPTHFPRSASETEAFCNIPAMHSTPPILRTEHQMYFGSQQEQFGFHSSAGPRA
EQGESQVCGLSQHPGGPSLELYLEQVQLDMLYDLDRSEFEQYLGPAPHKPESGSPSSNKE
TNSVS
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcagccacgacctcgctcacctccagccccgcgcaaacatgttcgaaagcgag
gagccaggggccgccgagcgggaacagatgagcgacttgcgctcgccgggttcaaggccc
tccagccccatgtctgtgaactcggactccagctgcaacagtcccgaacccaagtctgcc
tcgacgcagagggtcaggagacccctgaacgcgttcatcatttggaccaaagaggagcgc
aggaggctggcgcagctcaacccagacctagagaacacggacctgagcaaaatccttgga
aaaacctggaaggccatgtccttggcagagaagcgtccatacatgcaggaggctgaacga
cttcgggtgcagcacaccattgactaccccaactacaaatacaggcctcgtcggaggaag
cagctgaagaagggcgccaaagctcaaacatcagaagcttcttcaggcttcggcattccc
tacaacctcacctacctgctccagaaccagcagcaaaatgcaccttccttctctcacgtg
cccatgcatggcgcctatacagaccccacacatttcccaagatcagcatcagaaacagag
gctttctgtaacatccctgccatgcactcaaccccgcctatcctgaggacagagcatcag
atgtactttggctcccagcaagagcagtttggtttccacagctctgcaggtcctcgcgct
gagcagggggagtcccaagtctgtgggctctcacagcaccctgggggcccctccctggag
ctttacttagagcaggttcaactggacatgttgtatgatctggaccgcagcgagtttgaa
cagtacttgggcccagctcctcacaaaccggagtcaggaagtcccagcagcaacaaagaa
acaaattcagtgtcataa
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