Oryzias latipes (Japanese medaka): 100335144
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Entry
100335144 CDS
T02443
Symbol
pax1
Name
(RefSeq) paired box protein Pax-1
KO
K09382
paired box protein 1/9
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ola03000
]
100335144 (pax1)
Transcription factors [BR:
ola03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
100335144 (pax1)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
Frankia_peptide
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
100335144
NCBI-ProteinID:
NP_001165520
UniProt:
C6KTG1
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All DBs
Position
22:complement(16415214..16418977)
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AA seq
356 aa
AA seq
DB search
MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQNDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYESSKQASAQAGLPYNHIYPYSYPNTMSPPSTKMGSPPGVP
VTPGHVSISRAWPSPHTVSNILGIRAFMDPTAIAGTEGYPPKMEEWSSVNRAAFSAPHTV
NGIDKSAIDADIKYAQPSSTLSSYVSACAYSTPNQYGVYSGPAGGYVAPGHHHWQPQSTA
LSHPGSGMSMHAGEIHSPMAFKHQVREDRKPPSPLSKQQHEDLNGVHGLSLATSSS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctatggagaggtgaaccagcttggcggcgttttcgtcaatgggcgaccc
ctgcccaatgccatccggttaagaatagtggaactggcgcagctcgggatcaggccctgc
gacataagccggcagctgcgagtctctcatggctgcgtgagcaagattttagcgagatac
aacgagactggctccatcttgcccggtgccatcggtggaagcaagccacgggtcacgacg
ccgaacgtggttaaaaatatcagggaatacaaacagaacgaccccgggatctttgcctgg
gagattcgggacaggcttttggcagacggcgtttgtgacaagtacaacgtcccgtctgtt
agttcgatcagcaggattttacgcaacaagattgggaacctctctcagcctaaccagtat
gaaagcagcaagcaagcctccgcgcaagccgggctcccctacaaccacatttacccttat
tcctaccccaacaccatgtcgccccccagcaccaaaatgggaagccctcccggagtacca
gtgacgccgggacatgtgagcatatccagggcttggccttctccgcacaccgtcagtaac
atcctcggaatacgcgccttcatggatcccacagctattgcagggacggagggataccca
ccaaagatggaggagtggagcagcgtcaacagagcagctttttctgcgccccacacggtc
aacgggatcgacaagtcagcaattgatgccgacataaaatacgcacagccttcctcgaca
ctgtccagttacgtctcggcgtgtgcctattctacacccaaccagtatggggtctacagc
gggcccgcaggcggctatgtggccccgggccaccaccactggcagccacagagcacggct
ttgtcccacccggggagcggaatgagcatgcacgcaggagagatccactcacccatggcc
ttcaagcaccaagtcagagaagatagaaaacctcccagtcctctgagcaaacagcaacat
gaagacttgaacggggttcacggactcagtctcgctacctcatcatcataa
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