Oryzias latipes (Japanese medaka): 101154793
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Entry
101154793 CDS
T02443
Symbol
arhgef28
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101154793 (arhgef28)
Membrane trafficking [BR:
ola04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
101154793 (arhgef28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
Prok-RING_1
SOS1_NGEF_PH
PHD
C1_2
PH_13
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
101154793
NCBI-ProteinID:
XP_020563180
LinkDB
All DBs
Position
12:5498575..5557106
Genome browser
AA seq
1713 aa
AA seq
DB search
MELNRKEAPLYGQVEAQIILQARAPVDAEFYVVTKGSRLTHVTPATACEDGRTLRFTVPG
HDLVEAVSVTPYICTKDQVNPCQGQTTLQYVRDLAQETAEYLSANIKQLDLQNYSDILKR
FPALGLAVDEEVCDGLSDCRRSSGSEADVTQLDEGITQALANMDYPWQWEGKDSQPGEDS
EHRSRKSLLQLAVRLGLVRLTRFLIHQPTGRRALALRGQREETPVHWPHDTLTMLSSSSG
SADAFFPGLWCLWSDSSRMLRVCPRRDSVVLTVQQVVDGDPQDGVLLLRKSLKDPSVHKL
IKFLRAGAPEERTSIDDVHLSDEGREVHVEEDVLVDNVFEEQLVLSLDEDEEYLSSLSVN
GHPLPSSEDQRQFSQTVNNTGLLMNSQSSLQTQLQKSDVEVRVRGVTCSSTGTDDSLWDS
EDILLATDTPPPHLEDFHPTCAPRLSPLHRLRNCPASCEQTGESLLVETCDLSLVALEVN
SEEENEPNSPLSILEKPSLKDLRDEGCRLRSYSSSKISFRPRFSKEHPASDISSDAALHS
VGHSRSLLQALSLSKSTLSLSLLHHGKQRASIISDQSHEKREIRFRKRAQSADDEGSMEL
AESLQHLTLSEFLKEIEEEESDKYNIPAKTESEKYKVIRTFSFLKSRMSSTRNKSKGKGK
DREAKDKQLNGHRFATGSCLGAPQCVVCDKPASGKDLLHCPDCTAIVHKACKESVPPCLK
KPQDKYAVSTVKNRTASLPQNFTVRDSPQFSAIPISSSLPVMTPKERRDALTQSYSPSGS
LPNSDSLLSESSETELEVQKLNGQSEEFVPTPLSSTSTDSCFAEDCLDSFAHSYSDVLTD
SVDFEAESWSLTVEHKFSKKQDKRDAKRQDVIYELMQTEFHHLQTLHIMGEVFRRGMKED
VQLDADTVERVFPCLDQLLALHHAFFGALKERRHNSAVPQEHKNYLIHQIGDILLQQFSG
ESGDKMKHVYGEFCSRHNEAVSFFKELQQHNKRFQSFIKQQGSNSLVRRREIPECILLVT
QRITKYPVLLERILQYTQEETEEHSDLSKALAQIREVIAAVDQRVSEYERHQRLQEVWNR
IDSRSMAKLKDGCTVRKQDMMRPEQILKHQGLLLWKTATGRLKDVQAVLLTDRLIFLQEK
DQKYIFATVDQKPPVIALQKLIVREVANEERGMFLISASSSGPEMYEVHTSSKDERNTWM
RLIREAVESCPEEEEEWASESEEEKKAAKARLQKIHRLKESLMIQDQQVCSCLEEKLQIY
TELSSLNGWTGAAQVEARLQVQPQSEELPQAAGLLAEALQAAKKLKATLSSDACSPSESN
QDSDTDCPLPDTPTEPTSDFSEDSPDNPEAGEGNWMDALVLQTSPELKNSNLGTIDSMVA
ESVQNLTRLLYSLQAAVAIQDTCYEVQRLLLEESGRPSPRAQRVHLSSPWANTLQEQEKQ
RNLEKQREEVAAAQRLRDKLRQDKERWERECQAKESQQGEQESRLQERERQCQLTAEKLK
QEKKELDGQLEEYQQSLERLREGQRSVERERERLDSQQRLLQTWKHGRQSSLPAVIPHMI
IPLDGQQTSPPSQSRGQAGNGSVFVNEAVLTSTNNRHHKRNGPSTHNCLNTLLARTNDRR
SAMVPPPHSQNSDSQDWTVGTGYLCSPAETFGLQHSSTDPSFNCETWTSAASGANPYPVF
PHPSDPQLDLSTLVSLETDSDGEESREETIVYL
NT seq
5142 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaatagaaaagaggcgcctttatatggacaggtggaggctcagataatatta
caagcaagagctcctgtggacgcagagttttacgtggtgacaaaaggctccagacttaca
catgtaacccctgcaacagcatgcgaagacgggcggactctccgcttcactgttccaggt
catgacctcgtggaagctgtgtcagtcacaccctacatttgcacaaaggatcaagttaat
ccatgtcagggtcagacgacccttcaatatgtcagggatcttgcccaggaaacagctgag
tacttaagtgcaaacattaagcagcttgaccttcagaactacagcgatatcctgaagagg
tttcctgctttgggactggccgtggatgaggaagtctgtgatggactgtcagactgcaga
cgaagttcaggcagtgaggccgatgtgacccagctggatgaggggatcacacaagccctg
gctaacatggattacccttggcagtgggaaggcaaagacagtcagcccggagaagattct
gaacatcgttccagaaagagtctcctacaacttgcagtgcgtctgggtttagtccgtctt
acccgttttctaattcaccaaccgacaggtcggagggctctggctttacggggtcagagg
gaagaaacacctgtccactggcctcacgacactcttacgatgctgtcaagttcttcagga
tctgctgacgccttctttcctggtctttggtgcttgtggtccgacagctccagaatgcta
agggtttgtcctaggagggactctgtcgtcctcacagtgcagcaggtggttgacggcgac
cctcaggacggcgttctgctccttcgtaaaagccttaaagaccccagtgtccacaagctg
atcaaatttctcagagctggtgctccagaggagaggacgagcatagacgatgttcatctg
agcgatgaaggcagggaggtccatgtggaggaggatgtgctggtggataatgtttttgag
gaacagctggttttgtcgctggatgaagatgaggaatacttgtcctcattatcagtaaat
ggtcaccctctgccgtccagtgaagatcagcggcagttcagccagactgttaacaacacc
gggctcctcatgaacagccaaagcagtctgcagactcagctccagaagagtgatgttgag
gtcagagttcgaggtgtgacgtgcagcagcacggggacggacgactctttatgggactcg
gaagacattcttcttgcaaccgacacacctccaccccatttggaggactttcaccccacc
tgtgcaccgcggctgtcccccctccacagactaaggaactgtcctgcctcctgcgagcag
acgggagaaagtctgctggtggaaacctgcgacctcagtctggtggctctggaagttaac
agtgaagaagaaaacgagccaaactctccactgtccatccttgagaaacccagtttgaaa
gatttaagggacgaaggatgtcggttgcgctcctactcctcctccaaaatcagtttccgt
cctcggttttctaaggagcaccctgcatccgacatcagctccgatgctgcgctccacagt
gtcggccacagccgatctctccttcaggccctctctctgtctaaatccaccctgtctctg
tctctgctccaccatgggaagcaacgagcctccatcatatcggatcagtcgcacgagaaa
agggagattaggttccgtaagcgcgcccagtctgctgacgatgagggcagcatggagctc
gcagagtcgcttcagcatctcaccctgtctgagtttctcaaagaaattgaagaagaggag
tctgataaatacaacattccagccaagactgaatcggagaagtacaaagtcattcgtacc
ttcagttttctcaagagcagaatgtccagtacgcgcaacaagagcaaggggaaaggaaag
gaccgagaggccaaggacaagcagctgaatggacatcgctttgcgacaggctcctgttta
ggagccccgcagtgcgtggtttgtgacaaaccggcttctggaaaagacctcctgcattgt
ccagattgcactgccattgtccataaggcctgcaaggagtctgtccccccgtgtttgaag
aaacctcaggacaaatatgccgtttccacggtgaagaacaggacagcatcccttccacag
aacttcacagtcagggacagtcctcagttttctgccatccccatctcctcttctctgccg
gtcatgaccccaaaggagaggagagatgcgttgacccagtcatactctccttctggaagc
ttacccaacagtgacagtttactcagcgagagctcagaaactgaattggaggtccagaag
ctgaacggccaatcagaagagtttgtgccaaccccgttgtcatccacttccaccgactcc
tgctttgctgaagactgtttggactcattcgcacacagctacagtgacgtcttgacggat
tctgtggactttgaggcggagtcgtggagtctgacagtggagcacaagtttagcaagaag
caggacaaacgtgatgccaagaggcaggatgtcatctatgagctgatgcagacggagttc
catcacctgcagactctgcacatcatgggtgaggttttccgacgaggcatgaaggaggac
gtgcagctggatgctgacacagtggagcgggtcttcccctgtctggaccagctgctcgcc
cttcaccacgcattcttcggtgccctgaaggaacgaagacacaactcggccgtcccgcaa
gaacacaagaactacctgatccaccaaatcggcgacattttgctacaacagttttcaggt
gagagcggagataaaatgaagcacgtgtacggcgaattctgcagtcgtcataatgaagcc
gtcagtttctttaaggagctccagcagcacaataagagatttcagagctttattaagcaa
caaggaagtaactctttggtgagacggagggagatcccagagtgcatcttgttggtaact
caaaggattacaaagtacccagtactgctggagaggatcctgcagtatactcaagaggag
acagaggagcacagcgacctgtcgaaagctctggctcagattcgagaggtgatagcagcc
gtggaccagagggtcagcgaatacgagcgccaccagaggttacaggaagtgtggaaccgc
atcgacagccgcagcatggccaagctgaaggacggatgcactgtccgcaagcaggacatg
atgagaccggagcaaattctgaaacaccagggcctgcttctgtggaagactgcaactggg
cgccttaaggatgttcaggcggttcttctcacggaccggctcatcttcctgcaagaaaag
gaccagaagtatatatttgccacagtggaccagaagccccccgtcatcgctttgcagaag
ttgatagttcgggaagttgccaacgaagaaagaggcatgtttttgatcagtgcctcgtct
tcaggtccagaaatgtacgaggtccacacttcctccaaagatgaacgaaacacttggatg
aggctcatcagagaggccgtggaaagctgtccagaggaagaagaggagtgggcatctgaa
tcagaagaagagaagaaagctgctaaagctcgtttgcagaagattcatagactgaaagag
agcttgatgatccaggaccagcaggtctgctcctgcctggaggagaagctgcagatctac
acagagctctcctctctaaatgggtggacgggagctgctcaggtggaggcgcgactgcag
gtccagccgcagtccgaggagctgccacaggctgcagggctgctggctgaagcgctgcaa
gcggctaagaagctgaaggccacattgtcctctgacgcctgttctccatcagagtccaac
caggactcagacactgactgtccgctccctgacacccccacagagcccacgtcagacttc
tctgaggactcgccggataacccagaggctggcgaaggcaactggatggacgctttggta
ctgcagacctcacctgagctgaaaaacagcaatctgggtaccattgactccatggtggct
gaaagtgtccaaaacctgactcggctgttgtacagtctgcaggccgccgtggccatccag
gacacctgctacgaggtccagaggctcctcctggaggagagtgggcgcccctcgccccgg
gcccagcgggtgcacctttccagtccctgggcaaacaccttacaggagcaggaaaagcag
cgcaacttggagaagcagagggaggaagtagccgcggcccagcggctccgtgacaaactg
cgccaggacaaggagcgctgggagcgagaatgtcaggctaaagaaagccagcagggggag
caggagagcagactgcaggagagggaaaggcagtgccagctgactgcagagaagctcaag
caggagaagaaagagctggatggacaactggaagagtaccagcagagcctggagcggctg
cgcgagggccagaggagcgtggagcgggaacgcgagcgtctggacagccagcagaggctg
ctccagacctggaagcacgggcgtcagagcagcctgcctgctgtcatacctcacatgatc
atccccctggatgggcagcagacttcaccaccgagtcagtccagagggcaggccggtaac
ggctctgtgttcgtgaacgaggccgtactcaccagcaccaacaaccgccaccataagaga
aatggccccagcacgcacaactgtctcaacaccctgctggccagaaccaacgatagacgt
tctgcgatggttccacctcctcacagccaaaactcagactcccaggactggacggtggga
accgggtacctctgcagccctgcagaaacctttggacttcagcactcaagcacagatccc
agcttcaactgtgagacctggacgtcagcagcaagcggagccaacccatatccagtgttc
ccgcaccccagtgaccctcagctggaccttagcacgctggtttccttggagactgacagt
gatggggaggagagcagggaggaaaccattgtgtacctctga
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integrated database retrieval system
