Oryzias latipes (Japanese medaka): 101154816
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Entry
101154816 CDS
T02443
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101154816
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Major cadherins
101154816
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Fibulin_C
Stevor
DUF443
Motif
Other DBs
NCBI-GeneID:
101154816
NCBI-ProteinID:
XP_023805966
UniProt:
H2MF86
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All DBs
Position
20:24652904..24770678
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AA seq
803 aa
AA seq
DB search
MLTRNCLLLFLWILVNAGSVSSSRPPSSPLGRGRAGREHARSSAGSARNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDKGDSLVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREEKPYYTLRAQAVDIDTNTPLEPESEFVIKVQDINDNEPKFLEGPYVASVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEEYQV
LIQAKDMGGQLGGLAGTTIVNITLSDVNDNPPRFSKSFFHLRVPESSAVGSAIGRIKAHD
LDIGRNAEVEYTIVPGDGGTVFDITTNEHNQEGIVILKRPLDYESKKAYTFKVEASNAHM
DPRFQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASS
SPVRYSIDWRSDLDSYFDIDPVEGTISTNDLLDRETIAQHNISVVATKLNSPVLTSRVAV
TVHVLDINEFPPELASPYETLVCENARLGQVIQTFGAKDKDVPSAGQQFSFRTPKEDMKN
KNFTIRDFGNNTAGIVTKRVGFRRRLQEIYFLPVVIEDNGYPPKSSTGTLTIRVCGCQSD
GSVLSCSAEAIFLPVGLSTGALIAILLCIVILLGIVVLYVSLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLYRRDVKPEMKRSPKPPVSQDSADIRDF
IHQRLVEHDLDNSAPPYDSLATYAYEGEGSVAESLSSIESIAVDLEEDYDYLRDWGPRFK
TLAGIFGEQSETQSDSTNTENAH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaggaactgcctgctgctgttcctgtggattctcgttaacgcgggttcggtt
tcttcctcacggccaccttcatctccactgggacgaggcagggcgggaagggagcacgcc
aggagctcggcgggctctgcgaggaatggagcggctggatttcagcgggtcaagaggggc
tgggtgtggaaccagttctttgtactggaggagtacatggggtcagaccctcagtatgtg
ggcaagctccacactgacctcgataagggggacagtttggtaaagtacaccctctcaggg
gatggtgctggctccattttcacgattgaccaaacgacaggggacatccatgccttaagg
agtctggacagggaggagaagccttactacaccctgcgtgcccaggctgtggacattgac
accaacacccccctggagcccgagtctgaatttgtaatcaaagttcaagatatcaatgac
aatgagccaaagttcttggaaggaccgtacgtagccagcgttcctgagatgtcaccagtc
ggaacctacgtgacgcaggtgacagccactgatgcagatgaccccacttatggaaacagt
gccagagtggtctacagcatcctccacggccagccgtacttctctgttgaccccaaaaca
ggggttataaagacagccttgcccaatatggacagagaggtgaaggaagaataccaggta
ctaatccaggccaaggacatgggaggccagctgggaggactggccgggactacgatcgtg
aacatcaccctcagcgatgtgaacgataatccacctaggttttcaaaaagtttctttcac
ctaagagttccagaatcttccgcggtgggctctgccattggcaggatcaaagcgcatgat
ctggacatcggtagaaatgctgaagtggagtatacgatcgtgccaggtgatggtggcacc
gtgtttgacatcaccaccaacgaacacaaccaagagggcatcgtcattctcaaaaggccg
ctggactatgagagcaagaaggcatacaccttcaaggtagaggcctccaacgcccacatg
gacccgcgctttcagagctttggggccttcaaagacaccgcaacagtaaagattaacgtg
ttggatgtggatgagcccccagtgttcaataaaccctcctatgtgatggatgtgtatgag
gacacacccgcgggcaccatcatcggagcggtgacagcccaggatttagatgccagcagc
agcccagtcaggtattccatcgactggaggagcgacttggacagctactttgacatcgat
ccagtggaaggcacgatttccaccaacgacctgctggacagagaaaccatcgcgcagcac
aacatctccgtcgtagccaccaaactgaacagcccggttctgaccagccgggtggccgtc
accgtccacgtgctggacatcaacgagttcccccctgaactggccagtccgtacgagacc
ttggtgtgtgaaaatgccagactgggacaggtgattcaaacctttggtgcaaaagacaaa
gacgtaccgagcgctggacagcagttctccttcagaacccccaaagaagacatgaagaat
aagaacttcacaatccgagactttggaaataacacagctggaatcgtgaccaaacgggtt
ggcttccgacgacgtttacaggagatctacttccttcctgtcgtgattgaagacaatggc
taccccccgaagagcagcacaggcacgctgaccatccgggtgtgcggctgtcagtcggac
ggctctgtgctctcatgtagtgcagaagccattttccttcctgtgggtctgagcaccgga
gcgctgattgccatcctgctgtgtattgtcatcttgttaggtattgtggttctctatgtg
agcttgaggcgacagaagaaaaaggaaaccctcatgtcatccaaagaggacatccgagac
aatgtgatccactatgatgatgaaggaggaggagaagaggacacacacgcctttgacatg
ggaacgctccgaaaccccaaagttgtcaaagagaacttgtaccgcagggatgtcaaaccg
gagatgaaacggagcccgaagccgcctgtctctcaggacagcgcagacatccgagacttc
atccatcagcggctggtagagcacgacttggacaactcggccccaccctacgactccttg
gccacgtatgcttatgagggggagggctctgtggcagagtcactgagctcaatcgagtct
atcgctgtagacctggaggaggactacgattaccttagggactgggggccccgctttaag
acgctggcagggatttttggggaacagtcagaaacccagtcagactccacaaacacagaa
aatgctcactga
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