KEGG   Oryzias latipes (Japanese medaka): 101154851
Entry
101154851         CDS       T02443                                 
Name
(RefSeq) cullin-4A
  KO
K10609  cullin 4
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03420  Nucleotide excision repair
ola04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101154851
  09124 Replication and repair
   03420 Nucleotide excision repair
    101154851
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ola04121]
    101154851
   03400 DNA repair and recombination proteins [BR:ola03400]
    101154851
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ola04147]
    101154851
Ubiquitin system [BR:ola04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     101154851
DNA repair and recombination proteins [BR:ola03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101154851
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101154851
Exosome [BR:ola04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   101154851
SSDB
Motif
Pfam: Cullin Cullin_Nedd8
Other DBs
NCBI-GeneID: 101154851
NCBI-ProteinID: XP_004067119
LinkDB
Position
3:16422123..16430679
AA seq 757 aa
MAEDTRQNKRASFSALTELSTNGMARTAALASGKTGASKKLVIKNFKDRPKLAENYTEDT
WLKLRDAVSAIQNSTSIKYNLEELYQAVENLCSYKVSPTLYKQLRQVCEDHVKAQIHQFR
EDSLDNLSFLKRMNRCWQDHCRQTIMIRSIFLFLDRTYVLQNSLLPSIWDTGLELFRTHI
VSDSAVQKRTVEAILEQIELERNGETVDRSLLRSLLGMLSDLQVYKDSFEERFLAETDRL
YAAEGQRLMQERDVPEYLHHVARRLEEENDRILSYLDQSTQKPLICCVEKQLLGEHMTAI
LQKGLSNLLDENRVTELALLYQLFSKVKGGLPTLLQFWRDYIKSFGGEIVCTPEKDKDMV
QDLLDFKDKMDNVAQSCFGRNEGFINAMKEAFETFINKRPNKPAELIAKYVDSKLRAGNK
EATEEELERILDKIMIIFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHE
CGAAFTSKLEGMFKDMELSKDIMIQFKQHMQNQSEPSNIELTVNILTMGYWPSYTPMEVH
LPAEMVKLQEVFKLFYLGKHSGRKLQWQPTLGHAVLKAEFKEGKKELQVSLFQTLVLLMF
NEGEEFSVEEIRAATGIEEGELKRTLQSLACGKARVLNKNPRGKDVEDGDRFNFNSDFKH
KLFRIKINQIQMKETVEEQVNTTERVFQDRQYQIDAAVVRIMKMRKTLSHNLLVSELYNQ
LKFPVKPGDLKKRIESLIDRDYMERDKETPNQYHYVA
NT seq 2274 nt   +upstreamnt  +downstreamnt
atggcagaggacacacgacagaacaagagggccagcttctccgctttaacggagctcagc
accaacgggatggccaggacagccgctctagcatcgggcaaaacgggagcttcaaagaag
ttggtgataaaaaattttaaagaccggcccaaactagcagagaactacaccgaggataca
tggctgaagcttcgagacgctgtgagtgctatccaaaacagcacttcaattaagtacaat
ctggaagagctctatcaggctgtggagaacctgtgttcctataaagtctctcctaccttg
tacaagcagctgcgtcaggtctgcgaggatcatgtgaaggcccagatccaccagtttaga
gaagattctttggacaacctttctttcctgaaacgaatgaatcgctgctggcaggaccac
tgcaggcagactataatgatcagaagtatatttctcttcttggatcgtacttatgtcctt
cagaactctctcctcccgtccatctgggataccgggctagaactttttcgcactcacatt
gtgagcgacagtgcagttcagaaacgaaccgtagaagccattttggagcagattgaactg
gagcgtaatggagaaactgtggatcgcagcctgctccggagtctcctcggcatgctgtca
gatctccaggtctataaagactcgttcgaggaacgattcttggctgaaaccgatcgactc
tacgcagcggagggacagcggctaatgcaggagagggatgtacccgagtatttacaccac
gtggctcgtcgtttggaggaagaaaacgatcgaatcctgagctatctcgaccagagcact
caaaaacctcttatttgctgtgttgagaaacaacttttaggagaacacatgactgcaatt
ttacaaaaaggcctaagcaacctgctcgacgagaaccgtgttaccgagctggcccttctt
tatcagctcttcagcaaggtgaagggcggacttcccactctgctgcagttctggagggat
tacatcaagtctttcggtggagagattgtctgcactccggagaaagataaagacatggtt
caagacctgctggacttcaaggacaagatggacaacgtggctcagagctgctttggacgg
aacgagggtttcatcaacgccatgaaggaggcctttgaaaccttcatcaacaagaggccc
aacaagcctgctgagctgattgctaaatatgtagattctaagttaagagctggaaacaag
gaggcgacagaggaggagctggagagaatcctggacaagatcatgatcatcttccgcttc
atacacggtaaagatgtgtttgaagctttttacaaaaaggatttagccaagcgtctactg
gtggggaagagtgcctctgttgatgctgagaagtccatgctctccaaactcaaacacgaa
tgcggcgctgcatttaccagcaagttagagggcatgtttaaggacatggagctgtcaaaa
gacatcatgatccagttcaaacagcacatgcagaaccagagtgagccgagcaacatagaa
cttactgtcaacatcctgactatgggctactggccttcatacacacctatggaggtccac
ctgcccgcagagatggtaaaactccaggaggtgttcaagctgttttacctgggcaagcac
agtgggaggaaactgcagtggcagcccacacttggccatgctgtgctaaaggcagagttc
aaagagggaaagaaggagctgcaggtctccctgttccagacgctggtgttgctcatgttt
aacgagggagaagaattcagcgtggaggagatccgcgctgccactggcatagaggaggga
gagctgaagcgcacactgcagtccttggcttgtgggaaagcacgtgtcctcaacaagaac
cctcgaggaaaagatgtggaagatggcgatcgcttcaatttcaacagcgatttcaaacac
aaactgttccgcatcaagattaaccagattcaaatgaaagaaacggtggaggaacaagta
aacaccacagagcgtgtttttcaggacaggcagtatcagattgatgcggctgttgtgcgg
atcatgaagatgaggaaaaccctcagtcacaacttgctagtatcagaactctacaaccag
ctgaagttccccgtcaagcctggagatctgaagaagcggatcgagtcgctcatcgacaga
gactacatggagcgcgacaaggagactcctaaccagtatcactatgttgcctga

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