Oryzias latipes (Japanese medaka): 101154885
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Entry
101154885 CDS
T02443
Name
(RefSeq) short transient receptor potential channel 4
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ola04040
]
101154885
Ion channels [BR:
ola04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101154885
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
Ank
PKD_channel
Ank_3
Ank_5
YVC1_C
Motif
Other DBs
NCBI-GeneID:
101154885
NCBI-ProteinID:
XP_004075586
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All DBs
Position
13:8244342..8258600
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AA seq
928 aa
AA seq
DB search
MSQLYYKKTESSAYRDRIPLRIVRAEAELSPMEKAYLGAVEKGDYGSVKQALEEAEIYFR
ININCIDSLGRTALLIAIENENLEIIELLLSYNVHVGDALLHAIRKEVVGAVELLLNHKK
PRGEKQVPGILLDKQFSDFTPDITPIILAAHTNNYEVIKLLLQRGVSIPQPHAVRCSCVE
CMSSTDVDCLRYSRSRLNIYKALASPSLIALSSEDPFLTAFQLSWELKELSRVENEFKSE
YEELSHTCKQFAKDLLDQTRSSKELEIILNYRDDINPILDESTNDLARLKLAIKYCQKEF
VAQPNCQQLLASRWYDKFPGWRRRHWAGKLITCFFIGLLFPLLSIFYLIFPKSRYGLLIR
KPFVKFICHTASYLTFLLLLFLASQHIDSTGPNSLSHDVQGPPPTTVEWMILPWIIGFIW
TEIKQMWDNGLEDYADDWWNIMDFIMNSLYLATIALKIVAYVKMKQCNSNGTHVSRDDWE
VWHPTLLAESLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLA
FANGLNQLYFYYATEEKSCYGIRCLQQNNAFSTLFETVQSLFWSVFGLVSLYVTNVKPPH
EFTEFVGTTMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADMEWKFARTKLWMSYFEEG
GTLPPPFNIIPSPKSVCYLFGWIRKRFCRKPAKRIRQTFETLGTRAANNVRLNHEYQEVL
KNLVKRYVAAMIRDAKTEEGLTEENFKELKQDISSFRYEVLGMMKGKPHSAVPSPVVGST
LAYPGNSFKYYPRSSFDKSQKKAPVNTANNNLERKDSNISSTVYPENSINSPVVVVSTED
SHDTLSPEASKTGSLLRSDKFLSPEFYETFSPSEGDGQKSAGHNQDLLSAETANKETLEK
VNSDTQETEHPHAFNLSEVPNGPKKYKN
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctttattataaaaagacggaaagcagcgcgtacagggaccgcatccccctg
cgcattgtgcgagcggaggctgagctctcccccatggagaaagcctacctgggggctgtg
gaaaagggagactacggcagcgtgaagcaagccttggaggaggctgagatctacttcagg
atcaacataaactgcatagactctctgggacgcacagccctcctcattgccatcgagaac
gagaacctggagatcatcgagctgctgctcagctacaacgtccacgtgggggatgccctg
ttgcacgccatccggaaagaagtagtgggagctgtggagctgctgctcaaccacaagaaa
ccacgtggggaaaaacaggtccctggaattcttctggacaaacagttttcagacttcacc
ccagacatcactcccatcatcctcgcagcccacaccaacaactatgaggtgatcaagctc
cttctgcaacgcggcgtttctatacctcagccacatgccgtgcgttgcagctgtgtggag
tgtatgtccagcacagacgtcgactgcctgcgctactcacgctctcgccttaacatctac
aaggccctcgctagtccgtctctcatcgccctctccagcgaggatcctttcctcacagct
tttcaactgagctgggagcttaaggagctcagcagagtggagaatgagttcaagtcagag
tacgaagagctctcccacacttgtaaacaatttgcaaaggatcttttggatcagactcga
agttccaaggagctggaaataatcctaaactaccgtgatgacataaaccccatcctggat
gagagcaccaatgacctggcgcggctgaagctggccatcaagtattgtcagaaagagttt
gttgctcaacccaactgccaacagctgctggcgtctcggtggtatgataaatttccaggc
tggaggaggcgtcattgggcaggaaaactcatcacctgtttctttattggccttctcttt
ccactgttatccatcttctacttaatctttcctaagagccgatacgggctcttaatccgt
aaacccttcgtcaagttcatctgtcacacggcatcctacctgacctttctgttgctactc
ttcttggcctctcagcatattgactccacaggtccaaattctctgtcacacgatgttcaa
ggtccaccacccaccacagtggagtggatgatcctgccctggataataggttttatttgg
actgaaatcaaacaaatgtgggataatggtttagaggactacgcagatgactggtggaat
ataatggacttcattatgaactccttgtatctcgccaccatcgctctgaagatcgttgca
tatgtaaagatgaagcaatgcaattctaatggaacccatgtatccagggacgattgggaa
gtctggcaccccaccttgttggcagagtcattgtttgcgatcgccaacatctttagctct
ttgcgcctcatctctctgtttactgccaactcccacttgggtcctttacagatttccctg
ggtcgcatgctcctggatatcctcaagttcctctttatttattgtttagtgctgctggcc
tttgccaatggtctaaaccagctctacttttactatgcaacagaagaaaaaagctgttat
ggcatccgctgcctgcagcaaaacaatgcattttccacgctgtttgaaacagtgcagtcc
ttattttggtctgtgtttggtttggtttccctctatgtgaccaatgtaaagccacctcat
gaattcacagagtttgtgggcactaccatgtttgggacgtataacatcatctccttggtg
gtgcttctaaatatgctaattgcaatgatgaacaactcctaccaacacattgctgatcac
gctgatatggagtggaaatttgcaagaacaaaattgtggatgagctattttgaagaaggg
gggaccttaccccctccattcaacatcatacccagcccgaaatccgtttgttatctgttt
ggatggataaggaaacgtttttgtagaaagccagctaaaagaatccgtcaaacctttgag
actttggggactcgtgcagccaataatgtcagattaaaccacgagtaccaggaggtctta
aagaatcttgtgaaacgatatgtggcggcgatgatcagagatgccaaaacagaggaaggg
ttgacagaggaaaattttaaggaactgaagcaagatatatccagcttccgatatgaagtt
ctgggaatgatgaagggtaaacctcacagcgcagttccaagtccagttgtgggttcaaca
ttggcttaccctggaaactcattcaaatattaccccagatcttcttttgacaagtctcag
aaaaaggcaccagtgaataccgccaacaacaacctggagaggaaagactccaacatttcc
agcactgtttaccctgaaaactcaattaatagtccagttgttgtggttagcacagaagat
tctcacgacacattatcacctgaagcttcgaagacaggatcccttctgagatcggacaaa
ttcctttctcctgaattttatgaaacattttctccatcagaaggggatgggcagaaatct
gctgggcataaccaagaccttctgagtgccgagacagcaaacaaagagaccttggagaaa
gtaaactctgacactcaggaaacggagcatcctcatgcctttaatttaagtgaagtgcca
aatgggcccaaaaaatacaaaaactga
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