Oryzias latipes (Japanese medaka): 101154907
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Entry
101154907 CDS
T02443
Symbol
dhx32
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 isoform X2
KO
K18994
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 [EC:
5.6.2.6
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101154907 (dhx32)
Enzymes [BR:
ola01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101154907 (dhx32)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101154907 (dhx32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Motif
Other DBs
NCBI-GeneID:
101154907
NCBI-ProteinID:
XP_011486564
UniProt:
H2M1J9
LinkDB
All DBs
Position
19:complement(11829146..11834475)
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AA seq
730 aa
AA seq
DB search
MSTSEDADFFADSEESPGEDCAGFGGDLELNPFDGLPFSSRYYKLLKKRKTLPVWKVRSQ
FEESLVNNQLVVVSATAKSGRSTQVPQWCAEFCLSAQYQHGMVACTQTNKQQAVDLALRV
ADEMDVNIGHEVGYTIPMETCCSSDTVLRYYTDDMLLREMMSDPFLEQYGVILIDQAHER
TVSTDILLGLLKDILLQRPELRVVLLTLPHMTKKLLRHYGSIPLISLEASPAEVVKSNCS
SKDYFFSALRLVLDIHRTKESGDVLVFFASAEEVSRACSILQSESSRLRGKLDQLVPVIL
CSSQRELLTEQSSSTKSRNVFLCTQQWEDVWCIPKSVSFVVDTGFQKKMVYNPRVRAYSE
VLQPISLCQADIRKQLSAPSGKCFCLYSEDGLTENPPQILESNFTPTALFLKRMEIAGLG
QCRFIDRPDPESLMQALEELDYLAALDDDGNLSEIGIIMSEIPLEPQMAKAVLASCEFDC
VSEMLTIAAMLSAPSCFLKPSSGTTLEAARCRGKFQHPEGDHFTLINIYNAFKQSQREPY
ITPEKWCQNYFLDHSALKTADVIRSQLMNTLNRIELPISEPSFGTKTNTCSIKRALLAGF
FMQVARDVDGSGNYFILSHKHMAQVHPFSCYGAQSHKLGLPEWVVFNEYTLSENNCMKTA
SEISPQMFLQMAPLYYFYNLPPSESKDMLQVLLDSDGCSNCKEKTQTARMSGDANSCAAA
TQSHDRCAIQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtctacgtcagaggacgcagactttttcgctgacagtgaggaatctccgggtgaggac
tgcgccggctttggaggtgatctggagctaaatccgtttgatgggttacctttttcttct
cgttactacaaactgctgaagaagaggaagactctgcccgtctggaaagttaggtcccag
tttgaggaatctctggtaaacaaccagctggtggttgtgtctgcaactgcaaaaagtgga
agaagtacacaggtcccccagtggtgtgcagagttctgcctgtctgcacagtatcagcat
ggcatggttgcgtgcacgcagaccaacaagcagcaggcggtggatctggccctacgcgtg
gctgatgaaatggacgtgaacataggccatgaagtgggttacaccattccaatggagacc
tgctgctcctctgacaccgttttgaggtactacactgatgacatgttactaagagagatg
atgtcagaccctttcctggagcagtacggagttattcttattgaccaggcccatgaaagg
acagtcagcacagacatactgctgggtctcctcaaggacatcctgctgcagcggcctgag
ctccgagttgtgcttctcactcttccccacatgacaaagaagcttctcagacactacggc
agcatcccgctcatcagtctggaagcctcacctgctgaggtggtcaaaagcaactgcagc
agcaaagactacttcttttcagcgctgaggctggtgctggatatccatcggaccaaagag
agtggagacgttcttgtgttttttgcctctgctgaggaggtgtctagggcatgcagcatc
ctacagagcgagagctcaaggctgagaggaaagctggaccagctggtgcctgtcatcctg
tgctcgagccagcgagagctcctgactgagcaatcaagctccacaaagtccaggaatgtt
ttcctctgcacgcagcaatgggaggacgtgtggtgtatccccaagtctgtgagctttgtc
gttgatacggggttccagaaaaaaatggtttataatccaagagtgagggcttactctgag
gtcctccagcccatcagtctgtgtcaggctgacattcgtaaacagctctctgcaccatca
ggtaaatgtttctgcctgtattctgaggatggcctgacggaaaaccccccacagatcctg
gagtcgaacttcacaccaacagctctcttcctgaagaggatggagattgcagggcttgga
cagtgtcgtttcattgatagaccagatccagagagtctaatgcaggctttggaggagctg
gattaccttgccgccttagacgatgatggaaacttgtctgaaattggcatcatcatgtct
gaaatccctctggaaccccagatggccaaagctgtgctggcgtcctgcgagttcgactgt
gtgagtgagatgctgacaatcgccgccatgctatcagcaccaagttgctttttgaagcca
tcttctgggacgacccttgaagcagcccgctgccggggaaagtttcagcaccctgaaggc
gatcacttcaccctcataaacatctacaacgctttcaaacaaagccagagggaaccatac
ataactccagaaaaatggtgtcagaactattttctggatcattctgccctgaagacggcc
gacgtcatcaggtcacagctgatgaacacactgaacaggatcgaacttccaatatcagaa
ccctcctttggaaccaagacaaacacttgcagcattaaaagggctctgctggctggattc
ttcatgcaggttgctcgagatgtggacggatcgggcaactactttattttgtcccataag
cacatggctcaggtccacccgttctcctgttatggggctcagtcccacaagctggggctt
ccagagtgggtggttttcaatgagtacaccctgtcagaaaacaactgcatgaaaacggcc
tcggaaatttcccctcaaatgttccttcaaatggcaccgctgtactacttctacaatctg
cctcctagtgagagcaaagacatgctgcaagttctgctggactcagacggatgcagtaac
tgcaaagaaaagacccaaactgcaagaatgagcggcgatgcaaacagctgcgcagctgca
actcagagccatgacagatgtgcgattcagtga
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