Oryzias latipes (Japanese medaka): 101155015
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Entry
101155015 CDS
T02443
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
101155015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101155015
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101155015
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101155015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-B_box
zf-RING_2
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_5
MutS_III
FPRL1_inhibitor
Motif
Other DBs
NCBI-GeneID:
101155015
NCBI-ProteinID:
XP_020565989
LinkDB
All DBs
Position
2:17395029..17403547
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AA seq
797 aa
AA seq
DB search
MSAKLWTEEQFNCPVCLDLPNDPVTIPCGHSYCMACIRDFWTKDDPKGIYSCPQCRQTFC
PKPPLSRNTMLAEAVEQLRKGALNPTVRDSVRSARGVGTPSKARLSTAAVLCDMCKKEKR
AAVRSCLACMSSFCEEHLRPHQTKKSLKKHELIAPVSNLAEKICTQHKYMQEFFCRHCKM
FVCWLCTSNQHKDHECVSTKMERLERQKVLSEIQAENQQRLKDREQELKDLKKIMEVAKN
SANKAHSDTETVLRELQESVERLQELLQEALDEASLEKMGQAQEVVDNLEVEIKERKKRD
TEMKDLAGCDDHIYYLQTCDSMSTPLEVGDFPTVLVNADASFEPVRSAILALRERVEDLC
NLELGKMIKQVNDTTLFTLKDSNRNKGAKTGILKLFSRPNPRNANSSRAAAPTPSISVGG
VRSDRQGLGLRVPDVRSRDTRDRSSSPRLGNRRRRDERETETETNLQPSPTPSRREPPSL
WSRSNQSQAIPAATPTPVVVAPAPAPAPAPAASGAFSRMASIGSLFRSHRRGTTPATPVQ
EAPASAANPWGIAALPETPIEVNPSLFLDTPMPDTMTQAPAFPTLREINLDSIQAPEPRS
REEFLQYAVNLTLDPNTAHRRLVLSEGNTKATLQGVAQPYPDTPQRFDGWTQVMCQAPLQ
AQRCYWEVDWRGRGSSMGVAYGSLSRKGLDARSGLGYNAQSWTLELSDTCCSAMHDNQKK
DIPVTYSPRLGIYLDLAGGMLGFYSVADNMVPLHTFRANFTQPVYAVFGMGSGVGVGLDF
ALGQFTSSSDSIKICPL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccaagctgtggacggaggagcagtttaactgccccgtgtgtctggacctgccc
aacgacccggtcaccatcccctgcggacacagctactgcatggcatgcatccgggacttc
tggaccaaggatgaccccaaagggatctacagctgcccccagtgccgccagaccttctgc
cccaagccccctctgtccagaaacaccatgctggccgaggcagtggagcagctgcggaag
ggagccctcaaccccacggtgcgggactctgtccggagcgcacggggcgttggaaccccc
tccaaagccaggctgtccacggcggccgtgctgtgcgacatgtgcaagaaggagaagcgc
gcggcggtgaggagctgcctggcgtgcatgagctccttctgcgaggagcacctgaggccc
caccagaccaagaagtccctcaagaagcacgagctcatcgcgcccgtcagcaacctggcg
gagaagatctgcacgcagcacaagtacatgcaggagttcttctgccgccactgcaagatg
ttcgtctgctggctgtgcaccagcaaccagcacaaggaccacgagtgcgtgtccaccaag
atggagcgattagagagacagaaagtgctgtcagaaatccaggcggaaaatcagcagcgg
ctgaaggacagagagcaggagctgaaagacctgaagaagatcatggaggtggcgaagaat
tctgcaaacaaggcgcacagcgacacagaaacggtgctgagggagctgcaggagtcagtg
gagcgtctgcaggagctgctgcaggaggcgctggatgaggccagcctggagaaaatgggc
caggcccaggaggtggtggacaacctggaggtggagatcaaggagaggaagaagagggac
acggagatgaaggacctggcaggctgtgatgatcacatatactatctacagacgtgtgac
tccatgtccactcctctggaggtcggggactttccaaccgtgctcgtcaacgccgacgcc
tccttcgagccagttcggagcgccatcctggccctcagggagcgagtggaggatctgtgc
aacctggagctgggaaagatgatcaaacaagtcaacgacaccacgctgttcacactgaaa
gactccaataggaacaaaggagccaaaacggggattttaaaactgttttcacgtcctaat
cctcgcaacgccaacagcagccgtgcagcagctcccacacccagcatctcagtcggaggc
gtccgttcggacaggcaaggtttggggctgagggttcctgatgtgagaagcagagacaca
cgtgatcgctcgagttcacccagactgggaaaccggcgccggagagacgaaagggagacg
gagaccgagactaacctccaacccagtccgactcccagccgcagagagcctccgtctctg
tggagcaggtccaatcagagtcaagctattccagctgcaactccaactccggttgtagtc
gcacctgcacctgcgcctgcgcctgcacctgcagcatcaggggcctttagccggatggcg
tctatcggcagcctgtttcgctcccaccgccgcggcactaccccggccaccccggttcaa
gaagctccagcttctgcagccaatccatggggaattgccgctctgcctgaaaccccgata
gaggtcaacccaagcctctttctggacacgccaatgccagacaccatgacccaagcacca
gctttccctacattgcgagaaattaaccttgatagcatccaggcaccggaaccgaggtcc
agagaagagttcctgcaatatgccgtcaacttgacgcttgaccccaacacagcccacaga
cggctagtcctctctgagggcaataccaaagccaccctgcagggggtggcgcagccatac
ccagacaccccgcagcgatttgacggttggacccaggtgatgtgccaggcgccgctgcaa
gcgcagcgctgctactgggaggtggactggcgaggcaggggctcctccatgggcgtggct
tacggttcgctgagcaggaaaggattggacgcccgatcgggcctcggctacaacgcccag
tcctggactctggagctgtcggacacctgctgctctgcgatgcacgacaaccagaagaag
gacataccggtcacctactccccccgtctgggcatctacttggacttggccggcggtatg
ctggggttctacagcgtggcggacaacatggtgccccttcataccttcagggccaacttc
acccagccggtgtacgccgtgttcggcatggggagcggagtcggagtggggctcgacttc
gcactcggccagttcacgtcaagctctgatagcatcaagatctgtcctttgtga
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