Oryzias latipes (Japanese medaka): 101155045
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Entry
101155045 CDS
T02443
Symbol
med13l
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ola03021
]
101155045 (med13l)
Transcription machinery [BR:
ola03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
101155045 (med13l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
101155045
NCBI-ProteinID:
XP_023816319
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All DBs
Position
12:12444118..12517238
Genome browser
AA seq
2106 aa
AA seq
DB search
MTASANWVANGASLEDCHSNIFSLAELTGIKWRCYSFRSGGEFGPLISAPAQDDPVLRSF
MRCVHANLLCVWRRKIKPDAKELWIFWWGEEPNLSDVIHHELEVAEEGLWECGLSYECRT
LLFKAIHNLLERCLMDKGFVRIGKWFFKPHDLEEKSLGNSEHLSCCFSFFLHGESNVCTS
VEIVQHQAAYHITDHHIRLAQTSTTPVQVVLSPYSLSGTLTGQAYKMSDPAVRKLIEEWS
YFYPMVYPQKEGSGEKEKGEAGQACDRCSHVAVEVIVGGVRMTYPAAFVLITQGDLPVEQ
PPVSVAQGLTKEPNNCSVPLTPPTSPEQPCSADSGFVTSVSSVPTPDSSTGINSISPKHS
GKKLTCHVVHQAWKECYLNQPQHLATELTQRKEAPNGVTTWNFNDLGSRTPCSCSRLKQQ
KFNMAITSATNTQTISSSTQSSGPSLYPPSLPKHKTSDKTEKTDKQSKKPSVIPFHHRLT
VTQDGPLEQDSPGGPQMGGIVALDPPMETLASLPTCKYSKPMSNGRKPPESLLHSPMSPL
PPTLSPHPRMQDPEGLDVPLDATVCPDGGSGVGAITSETAVYTDLLRQRENGVSWWRGFR
TPRTDKTEFSPPELPLDNLEEMNLEVAADAVPLKRLYTQTHKRFKISEERVRDHIKALGL
FEQPGVEVLRENGEDPYDFKEGDIEYTFSSSKRLKGPGREPSKKAKGEEITNDASAVPDG
KDAMSIFNSAPKSEESGQDDAAAKANPSLTREKDLVVNISDLDNIFDEDEEELGTVYPNQ
TKLLVPTEDRPAGKEGRVNVPYPSTVADLQRMFPTPPSLEQHPAFSPITPHRDTPSLEPP
VPSGVADHLPPLASFQLAECRMEMEESVASPGQDDIKPQICSSMFAPLSCLPSQNLPPSK
IPDQCYYRPSWAVLPKMEHFTTIMHPRNVFSKDGYTNIPSVNALTDQEYGQMSGTTASVN
TTILPSPAMPQFSVPTPRTPRTPRGINAASSGQGSVKQDGTELSSPVSTPSTSLPLSSVE
PLGRPGPSLPEAHSLYVVLLLSDSVLSVFKDRNFDSCCICACNMNVKGADVGVYIPDSTC
EDQYRCMCGFSAIINRRLAHGTGLFLEDELDIFGRTSEVGQAAQRRLALCRRDPIMGDSR
AKQPQEATPASPSVMIVLQEQCSHPISSLASLHLPLSCSCHGRKGALLQSWMSEKQWADE
SDACVECYNALMQGLQYVDNPTGGKVDLAVVRSSALHSWPHTNVVDMSMLSSQDMVRMLL
SLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGSYGSEESPEPLPIPTVLVG
YDRERDFLALSPLALPFWEKLLLEPYGGQRDVAYIVLCPNSPSLLTAARSFFLELSAVYE
TCRLGKHRPLAKVSRDGLLQVGEDVEPEKLEDLDVDRWLTGPWAGQQHTDNLLKLKLYAY
TCKKQLGPQLSTLTLDSSLLLPPKAQPHINNSSLAQSASSGQPQSWPADGEQVSGAVNAS
NASTPTGATGLTGEATQAASSSSKGLPSATPSANSTAEHPEISCDQSRIGIPTLADSVDS
HINPPAVVIYIVDAFLSSAMTRNDGGEEEEGEEVELTSIWLLGLLRCYTEMLRTLPEKIR
PAVVLQVVPCQYLLQPASGESHLYMQHLRSLAFSCYSQSRRLLRQQTHIKSLTGFGPVSS
VGSVLKSPEHPSPLQLYSPPFILGPNRPKQPEPGEVWAELSPKYNVLFVGYCLSHDQRWI
LVSCTDQQGELLETCIINIDVPNRTRRPKVSPRKMGLQKLWDWCIGIIQMTSQPWRIVIG
RLGRLGHGELKDWSSLLGEHSLHSIGRQLREACRMCGISAADSPSILSACLVAMEPQGSF
VIMPDAVTMGSVFGRSTALNLQTSQLNTPQDASCTHILVFPTSATTQLAASSYPTEDNND
DMFDLPFPDELENDIGHDMMLITGNLHSSPNPSPVPSPGSLEMGSHFQHTRSQGERLLSR
DNPPEELKQQPLALGYYVSTAQANGIPHWFWASCPQAESQCPLFLKASLHHHISIAQSEE
IVSDKTKRAPHPLDSKTTSDVLRFVLEQYNALSWLTCTPATQDRQSCLPVHLAVLIQMYN
AILNML
NT seq
6321 nt
NT seq
+upstream
nt +downstream
nt
atgactgcatcggcgaattgggtggctaacggggcaagccttgaggactgccactccaac
atcttctctctggcggagttgactggcattaaatggcgttgctacagcttccgcagtggg
ggggaattcggtcctttgatctcggccccggcccaggacgacccggtcctgcgcagcttc
atgcgctgcgtgcatgccaacctgctgtgcgtgtggcgacgcaaaatcaagcctgacgcc
aaggagttgtggatcttctggtggggagaagagcccaacctctctgatgtcattcatcat
gagctggaagtggctgaagaggggctttgggagtgtggactatcctacgagtgcaggacc
ctcctgttcaaggcgatacacaacctgcttgaaaggtgtttgatggataaaggctttgta
aggattgggaaatggttcttcaagccacatgacctagaagaaaagtctttgggcaacagc
gagcacctctcatgctgcttctccttcttccttcacggggagagcaatgtgtgcacgagc
gtggagattgtccagcaccaagctgcataccacatcacagatcaccacatccgccttgca
cagacctctaccaccccagttcaggttgtgctgagtccatacagtctgagtggcactctg
actggtcaagcctacaagatgagtgacccggcagtacgaaagctcatagaagagtggagc
tacttttatccaatggtttatccacaaaaggagggaagtggtgagaaggagaaaggagag
gctggccaggcttgtgatcgctgcagtcatgtggcagtggaggtcatcgtagggggagta
aggatgacctacccagctgcttttgtgctgattacccaaggagacctaccagtggagcag
cctcctgtttctgtggcccagggcctcaccaaggagccaaacaactgcagtgtgccgctg
actccaccaacatcccctgagcagccatgctctgcggacagtggctttgtgacctccgtc
tccagtgtccccacaccagacagcagcacgggcatcaacagcatcagcccgaaacattct
gggaagaagcttacgtgtcatgtggtccatcaggcctggaaggagtgctatctcaaccag
cctcagcatctagcaactgagttaacgcagaggaaggaagcgccaaacggagtaacaaca
tggaattttaatgatctgggatctagaacgccctgcagctgttccaggttaaagcagcaa
aagtttaatatggccatcacctctgcaacaaacactcagactattagcagctccacacag
tcctctggtccgtcgttgtatcctccttcgctccctaaacacaagacaagtgacaagaca
gaaaaaaccgacaaacaatccaaaaaaccctcagtgatcccttttcaccatcgtctaact
gtcacgcaggacggccccttggaacaggactcacctggagggcctcaaatgggtggcatt
gttgcactcgatccacccatggagaccctggcctctctgccaacctgcaaatattccaaa
cccatgtcaaatggcaggaaacccccagagtcccttcttcattcaccaatgtctcccctt
ccacccacgctgagtccgcacccccggatgcaggatccagagggtttagatgtgcctctg
gatgctaccgtgtgtccagatgggggttcgggagtgggagcaatcaccagcgagacagct
gtgtacacggatcttctgaggcagcgggagaacggggtcagctggtggagaggcttcagg
actcccagaactgataagacagaattcagtccacctgaacttcccttagacaacctggag
gaaatgaacttagaggtggctgcagatgcagttccactcaaaagactctatacacagacc
cacaagagatttaaaatctctgaagagagagtgagggaccacattaaagcacttggcttg
tttgagcagccgggtgtggaggtactgagggagaatggtgaagatccctacgacttcaag
gaaggagacatcgaatacaccttctcctcctccaaaaggttaaagggtccagggcgagag
ccaagcaagaaggctaagggggaagagatcacaaatgatgcatcagctgttcctgatgga
aaagatgctatgtccatttttaactctgctccaaaatcagaggaatcgggtcaagatgat
gctgctgcaaaagccaacccttctctgaccagagaaaaagatctggtggtcaacatttct
gatctggataacatatttgatgaagacgaagaagagttgggcactgtttacccgaatcag
accaagctactcgtgccaacagaagatcgtcctgctggcaaagaagggagagttaatgtc
ccttatccatcaacagttgcagatctccagcggatgtttccaaccccaccttcgctagaa
caacacccggctttctctcccatcacaccgcatcgtgacaccccaagtctggagccccca
gtacccagtggagtggcggaccacctaccacccttggcttctttccagcttgctgaatgt
aggatggagatggaggagagtgtggccagtccagggcaagatgatatcaaaccacagata
tgttcctccatgtttgctcctttatcctgccttcccagccagaatctgccaccgtcaaag
attcctgatcagtgttattaccgtccatcctgggctgttttacctaaaatggaacatttc
accaccatcatgcatcctcggaatgttttctccaaggatggatacacaaacattcctagt
gtcaacgccctcactgaccaagaatatggccagatgagcggtacgactgcctctgtgaac
accaccatccttccttctcctgccatgccccaattttccgtgcccaccccacggactccc
cgtacgcccagagggattaacgctgcaagctcagggcagggctcagtgaagcaggacggc
actgagcttagctcaccagtttctaccccgtccaccagcctgccccttagttctgtagag
cccttaggacggcctgggccctctctgcctgaggcccacagcctgtatgttgtccttttg
ctctcagactctgtccttagcgtatttaaggatcgcaactttgacagctgctgcatctgt
gcctgcaatatgaatgtcaaaggggcagatgtgggggtgtacatcccagattccacctgt
gaagatcagtaccgctgtatgtgtggcttcagcgcgatcatcaacaggcggctggctcat
ggtacgggccttttcttggaagacgagctggatatatttggtcggacgtctgaagtgggt
caagcagcccagaggaggctggctttatgtcgtcgggacccaatcatgggggactccaga
gccaagcagcctcaggaggctacccctgcctctccatcagtcatgatcgttttgcaggag
cagtgctcccatcccatttcctctctggcatcacttcacctccctctcagctgctcttgt
catggacgcaagggggcactcctccaaagttggatgtctgaaaagcagtgggcggatgag
agtgacgcctgtgtggagtgttacaatgctttgatgcaggggctgcagtatgtggacaac
cccactgggggaaaagtggatctagctgttgtcagaagtagtgcccttcattcctggcca
cacacaaacgtggtggatatgagcatgttgtcgtcacaggatatggttcgtatgctgcta
tctttgcagcctttcctgcaggatgccatccagaagaagcgaacaggtcggacctgggaa
aacatccagcacgttcaggggccgctgacctggcagcagtttcacaagatggctggaaga
ggctcttatggttcagaggagtctccggagcccctgcccattcctacagtgttagtaggc
tatgaccgtgagcgggacttcttggctttgtctcctttggcattacctttttgggagaaa
cttctgctggagccatacggaggccagcgagatgttgcctacattgtgctttgccctaac
agtccctcccttctgactgctgcacggtccttcttcctggaactcagtgccgtttacgag
acatgccggcttgggaagcaccgtcctctggcgaaggtgtccagagatggtcttcttcag
gttggggaggacgtagagccagaaaagcttgaggacttggatgttgatcggtggttgacc
ggaccctgggctggacagcagcacactgacaacctcctcaaactaaaactctatgcttat
acctgcaaaaaacaacttggtccccagctgtcaaccctgactttggacagcagccttctg
ttgcctcccaaagcccagcctcacattaacaactcgtccctggctcagtctgcatcttca
gggcagcctcaaagttggccggctgatggagagcaggtttcaggtgctgtgaatgcatca
aatgcttccaccccaacaggagccacaggcctgaccggggaggcaacccaagctgcatcc
agcagctctaaagggctcccttctgccacaccatcagccaacagcacagcagaacatcct
gaaatctcctgtgatcagtcaagaattggcattcctacactggcggactcagtagacagc
catattaaccccccagctgtcgtcatctacatcgtggatgcctttctcagctcagctatg
acaagaaatgatggaggagaagaagaagaaggtgaagaggtggagttgactagtatctgg
ctgctggggcttcttcgctgctacacagagatgctacggactctgcctgagaagattaga
ccagcagtggtccttcaggttgtaccctgtcagtatcttctgcagccagccagtggagaa
agccatttgtacatgcagcacctgcgctccctggccttctcgtgttattctcagagcaga
cgacttctccgtcagcaaacacatattaagtccctcacaggttttggcccagtgtcctct
gttggttcagtgctcaagagtccagaacaccccagcccattacaactttactctccaccg
tttattcttggcccaaatcggcctaagcagccagagccaggggaggtgtgggcagaactc
tctcccaaatacaacgtgctctttgttggatattgcctatcacacgaccagcgctggata
ctggtctcctgcactgatcagcagggggagcttttggagacctgcatcataaacattgat
gttcccaacagaacaaggcgtccaaaagtatcacctcgaaagatgggactgcaaaagctg
tgggactggtgtattggtatcattcagatgacctctcaaccttggagaatcgttatcggc
cgcctaggcagacttggtcacggggagctgaaagactggagttctctccttggagaacat
tcgttgcattcgataggacgtcagctgagggaagcttgccgaatgtgtgggatctcagct
gccgactccccatctatcctcagtgcatgtctggtagccatggagccacaaggctctttt
gtaatcatgcctgatgctgtgaccatgggctctgtgtttggacgcagtactgctttgaat
ctgcagacatcgcagctaaacactccccaagatgcttcctgtacccacattttagtgttc
cctacttctgccactacccagctggcagccagctcctacccaacagaggacaataatgac
gacatgtttgacctccccttccctgatgagctggagaacgacattggccatgacatgatg
ctgatcacaggcaatcttcactcttcccccaacccgtccccggtgccgtcccctggttcg
ctggagatgggatcacatttccagcacactaggagccaaggggagcgcctcctgtccagg
gacaatcctccagaggagcttaagcagcagccgctggctctgggttactatgtctccact
gcacaggcaaatggaattcctcattggttctgggcctcctgcccacaagctgaaagccag
tgcccacttttccttaaggcctctctccaccaccacatttccatagcgcagtcagaagag
atagtgtctgataaaactaaaagggctcctcaccccttagactcaaagaccacctctgat
gtgctcaggtttgtgttggagcagtataacgctctctcttggctgacatgtactcctgca
acccaagaccgccagtcctgcctgcctgtgcacttggctgtgctgatccagatgtacaat
gccatactgaacatgctttag
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integrated database retrieval system
