KEGG   Oryzias latipes (Japanese medaka): 101155071
Entry
101155071         CDS       T02443                                 
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
  KO
K10752  histone-binding protein RBBP4
Organism
ola  Oryzias latipes (Japanese medaka)
Pathway
ola03082  ATP-dependent chromatin remodeling
ola03083  Polycomb repressive complex
ola04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:ola00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    101155071 (rbbp4)
   03083 Polycomb repressive complex
    101155071 (rbbp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    101155071 (rbbp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ola03036]
    101155071 (rbbp4)
Chromosome and associated proteins [BR:ola03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     101155071 (rbbp4)
  Histone modification proteins
   HAT complexes
    HATB complex
     101155071 (rbbp4)
   HDAC complexes
    Sin3A-HDAC complex
     101155071 (rbbp4)
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     101155071 (rbbp4)
    PRC2.2
     101155071 (rbbp4)
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     101155071 (rbbp4)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    101155071 (rbbp4)
  Chromatin remodeling factors
   NuRD complex
    101155071 (rbbp4)
   NuRF complex
    101155071 (rbbp4)
   NuRF complex (fruit fly)
    101155071 (rbbp4)
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_DCAF12 ANAPC4_WD40 Beta-prop_RIG_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_IFT140_1st MIOS_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 101155071
NCBI-ProteinID: XP_004082417
UniProt: A0A3P9K167 H2MRV9
LinkDB
Position
22:15000923..15005453
AA seq 424 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADS
EVQA
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggctgacaaagacgctgcatttgatgatgctgtggaggaaagagtgatcaatgaggag
tacaagatctggaagaagaacaccccttttctttatgacttggttatgacccacgcgctg
gagtggcccagtctcactgctcagtggctcccagatgtcaccagaccggagggaaaggat
tacagcgtgcacaggctggttctggggacgcacacttcagatgagcagaaccacctcgtc
attgccagtgttcagcttccaaatgatgacgcccagtttgatgcctcgcattatgacagt
gaaaaaggagaattcggaggttttggatctgtaagtgggaagattgagattgaaatcaag
atcaaccatgagggagaggtgaacagagctcgctacatgcctcagaatccttgcatcatt
gcaaccaaaactcccacaagtgatgtgctggtctttgattacacaaagcatccctccaag
cctgacccttctggtgaatgtaccccagatctgcgtctgaggggccaccagaaggaggga
tatggtctctcctggaaccccaatctcagtggatgccttctcagtgcttctgatgaccac
accatatgcttgtgggatatcagcactgtgcccaaggaggggaagatcgtggatgccaaa
accatcttcacaggccacactgctgtggtggaggacgtttcgtggcatctgctccatgaa
tcactttttggatccgtcgcagatgaccagaaactcatgatttgggacacacggtcaaac
aacacctccaaacccagccatgcggtggacgcccacacagctgaggtcaactgtctgtct
tttaatccctacagtgagttcattctggctacaggctctgctgacaagactgtggctctt
tgggacctgaggaacctgaagctgaagctccactcctttgaatctcacaaagacgagatc
ttccaggttcagtggtctcctcataatgagaccatcctggcctccagcggaacagacagg
cggctcaacgtttgggacctcagtaagattggagaggagcagtcgcccgaggatgctgag
gacgggcctcctgagctgctgttcatccacggaggacacacggctaagatctccgacttc
tcctggaacccaaacgaaccgtgggtcatctgctctgtatcagaggacaacatcatgcaa
gtgtggcagatggctgaaaatatctacaacgatgaggacccagagggtgcagcagattct
gaggtgcaggcatga

DBGET integrated database retrieval system