Oryzias latipes (Japanese medaka): 101155103
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Entry
101155103 CDS
T02443
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101155103
Spliceosome [BR:
ola03041
]
Common components
Common spliceosomal components
General mRNP proteins
101155103
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
101155103
NCBI-ProteinID:
XP_011473497
UniProt:
H2M208
LinkDB
All DBs
Position
5:19275541..19284821
Genome browser
AA seq
503 aa
AA seq
DB search
MADDLDIEALLDAPFRKEDKSQSPNGQEDRSKRPEKKRRSRSRSRDKKRSRSRERKRSRS
RERKRSRSKDRRRSRSRERRRSRERGGRYKDHHKHRRWSKSKSPVKKEKSPIRMPNDNLT
PEERDGRTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVEASS
VPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAANNLQRGLTGPMRLYVGSLHFNITED
MLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVG
HVTERTDPSSAPSILDNDELERSGIDLGTTGRLQLMARLAEGTGLQIPPAAQQALQMSGA
IAIGAMAAVSAAMNPSLNVNMNSGALNLPSQPLATHCFQLSNMFNPSSENTFGWEVDIQR
DVIEECNKHGGVVHIYVDKNSAEGNVYVKCPSIPAAMSAVNALHGRFFGGKMITAAYVPL
PTYHKLFPESVTATQLLVPPLRR
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacctggacatcgaggccctgctggatgctccgtttaggaaggaggacaag
agccagagtcccaatggacaggaggatcgtagcaagaggccagagaagaaaaggcgcagc
cgcagtcgcagccgggacaagaagcggagccgcagccgagaaaggaaaaggagtcgcagc
cgggagcgcaaacgcagccggagcaaagacaggagaagaagccgcagccgagagcgccgg
cgcagcagagagcgggggggccgctacaaggaccatcacaagcaccgtaggtggtcaaag
agtaagagtccagtcaagaaggaaaaaagtccaatcaggatgccaaacgacaacttaacc
ccagaggagcgcgatggccgaaccgtcttctgcatgcagctggcggcacggatccgacca
cgggacctggaggagtttttttcggcagtgggaaaagtgcgggatgtgcgaatgatctct
gacagaaactcccgcaggtcgaagggaatcgcttacattgagtttgtagaggccagctcc
gttcctttggccattggactgaccgggcaaaggctgctgggagtccccattatcgttcag
gcttcccaggcagaaaagaacagagctgctgctgctgctgcagctaataacctgcagcgg
ggcttgactggacctatgaggctgtacgtgggctcgctgcacttcaacatcacagaggat
atgctgcgaggaatctttgaaccatttggacggattgagaacatccagctgatgatggac
agtgagaccgggcgctctaaaggctacggcttcatcacattttcagacgcagaatgcgcc
aaaaaagctctggagcaactgaacggctttgagctggcaggtcggcctatgaaggttggt
cacgtgaccgaacggacagacccctcctcggctccgtccatcctggacaacgacgaactg
gagcgcagcggcatcgacctgggaaccacggggaggctgcagctcatggcccggctggca
gagggcaccggcctgcagatccctcctgcagctcagcaagctctccagatgagtggtgcc
atcgctattggggccatggctgccgtctccgctgccatgaatccctcactcaacgtcaac
atgaactctggcgctctgaatcttccttctcaaccgctcgccactcactgcttccagctg
tcaaacatgttcaaccccagcagtgagaacacatttggctgggaggtggacatccagcgt
gatgtgattgaggagtgcaacaagcatggaggagtggttcacatctatgttgacaagaac
tctgcagagggaaacgtttatgtcaagtgtccgtcaatccctgctgccatgtctgcagtc
aatgccctgcacggaagattctttggtggtaagatgatcacggcagcgtatgtacccctt
cccacctaccacaaactcttcccggagtcggtcactgccacacagctgctggtccctcct
ttgcgacgatga
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