Oryzias latipes (Japanese medaka): 101155125
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Entry
101155125 CDS
T02443
Name
(RefSeq) nucleolysin TIA-1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ola03019
]
101155125
03041 Spliceosome [BR:
ola03041
]
101155125
Messenger RNA biogenesis [BR:
ola03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101155125
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101155125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Nup35_RRM_2
Calcipressin
Motif
Other DBs
NCBI-GeneID:
101155125
NCBI-ProteinID:
XP_004074554
UniProt:
H2LB77
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All DBs
Position
12:3876934..3890217
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AA seq
386 aa
AA seq
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MDDEQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NESSSSKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPEKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVQGPIQQVPMAQQSTLGFAAQ
PYNQWGQWYGNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGMGALSNGGM
VEPGQGVNGTVLTNQAGMSTAGYPTH
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgagcagcccaaaaccctgtatgttgggaacctgtcccgggacgtgacagaa
gccctcatcttggagttgtttggccagatcggaccctgcaaaagctgtaaaatgattgta
gatacagcaggtcacgacccgtactgctttgtggagttctatgaacatagacacgccact
gccacaattgcagccatgaacggtcggaaaatattgggtaaggaggtgaaggtcaattgg
gccacaacgccaacgagccaaaagaaagacacgagcagtcactttcatgtttttgtcgga
gacctcagtcctgaaatcaccacagacgacataaaagcggcttttgctccgtttggcaaa
atctcggattgtcgggtggtgaaagacatggccacgggtaaatctaaaggttacggcttt
gtctccttctttaacaaatgggacgcagaaaatgccatccagcagatgggaggacagtgg
ctgggagggcgacagatcaggaccaactgggccaccaggaagcctgccccgaaaaccaca
aacgaatcttcaagttcaaagcagttgtccttcgatgaggtggtgaaccagtccagcccg
agcaactgcaccgtctactgcgggggggtcaccaccggtctcacagaacaaattatgcgt
cagaccttttcgccctttggccaaataatggaaattcgcgttttccccgagaaagggtac
tcgtttgtgagattcaactctcacgaggcagcggctcacgccatcgtttccgtcaacggc
acgtccatagagggctacgtggttaagtgttactggggcaaagaaaccacagacatggtc
cagggccccatacagcaggtacccatggcacagcagagcacactgggcttcgcagcgcag
ccttacaaccagtgggggcagtggtacggcaacacgcagcagatcgggcagtacgtgccc
aacggatggcaggtgccgagctacggcgtctatggacagacctgggatcagcagggctac
aatcatttacacgccggagccggatggacgggaatgggcgccctcagcaacggaggcatg
gtggagcccgggcagggcgtcaacgggacggtgctaaccaaccaggccggcatgagcacc
gccggctaccccacccactga
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