Oryzias latipes (Japanese medaka): 101155278
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Entry
101155278 CDS
T02443
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04142
Lysosome
ola04144
Endocytosis
ola05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101155278 (cltcl1)
04142 Lysosome
101155278 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
101155278 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101155278 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ola04147
]
101155278 (cltcl1)
Membrane trafficking [BR:
ola04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
101155278 (cltcl1)
Exosome [BR:
ola04147
]
Exosomal proteins
Proteins found in most exosomes
101155278 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
RMC1_N
Motif
Other DBs
NCBI-GeneID:
101155278
NCBI-ProteinID:
XP_023814032
LinkDB
All DBs
Position
9:complement(6130285..6161841)
Genome browser
AA seq
1686 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSYLTMESDKFICIREKVGDQNQVVIVDLLDPTN
PLRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTV
ALVTDSAVYHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFTVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLECGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENVVNYVTNVLQNPDLALKIAVRSNLAG
AEELFGRKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKATDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYSPDWIFLLRNVMRVSPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPTEGHLQTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDMYDIKRAVVHTHLLNPEWLLNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIV
NFSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPF
YDSAIVGRYCEKRDPHLACVAYERGQCDMELIKVCNENSLFKSEARYLVRRKDPELWAKV
LDEDNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYVNRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLGRAQLHRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLEEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTE
LAILYSKFKQQKMREHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAILTMM
NHPTDAWKESLFKDIIAKVANVELYYKSLSFYLEFKPLLVNDLLTILSPRLDHSRAVNFF
SKMNQLKLVKPYLRSVQSHNNKSVNEALNDLLTEEEDFQALRASIDAFDNFDTIVLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKEAELAETLLQWFLE
EGRRECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTV
DKLDIAESKRKTEEEVTEPQPIVFGQQLMLTAAAAPPVAPQPAYPGYGYPATAAGYPAQP
VYGFNM
NT seq
5061 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctccccatacggttccaggaacatctgcagctgcagaacctgggcata
aacccagccaacattggcttcagttatctgaccatggagtcggacaagttcatctgcatc
agagagaaggtgggagaccagaaccaagtggtgattgttgacttgttggaccccacgaac
cctctgaggagacccatttctgcagacagcgccataatgaatcccgccagcaaggttatc
gccttaaaggacgctgcaaagaccctgcagattttcaacattgagatgaaaagtaagatg
aaagctcacaccatgacggaggaagtcatgttctggaagtggatatcagtaaacactgtc
gccctggtgacggattcagccgtctaccactggagcatggagggggattcccaaccgacc
aaagtattcgatcggcacgccagtctggcgggatgtcagatcattaactaccgaactgac
gagcaacagaagtggttactgctgattggaatctctgcacagcaaaaccgtgtggttgga
gcaatgcagctttattccgtcgacagaaaagtgtcccagcccatcgagggccatgcggct
gcctttggggagtttacagtggagggaaatgccaaaccttccaccctcttctgctttgct
gtgcgctcacaggctggaggaaagttgcacataattgaagtcggtcagccagctgcagga
aaccagccgtttgctaagaaagcagtggatgttttcttccctccagaggctcagacagac
tttcctgtggccatgcagattggaaacaaacacggtgtaatatatttgattacaaagtac
ggttacattcatctgtacgaccttgagtgtggagtttgcatctacatgaaccgaatcagc
gcagagaccatctttgtaacggcgccccatgaggccacgtcagggatcatcggtgtcaac
aaaaagggacaagtcttatccgtgtgtgtcgaagaggagaacgttgtgaattacgtcaca
aacgtcctgcagaacccagatctcgctctgaagattgctgtgaggtcgaaccttgcggga
gctgaagaactttttgggaggaagttcaacaccctgtttgctcagggaagttactcagag
gctgcaaaggttgctgcatcagcacccaagggtatcctgcgaacggcagaaaccattcgt
aagttccagagcgtcccagcccagccgggtcaggcctcccctctcttgcaatactttggg
attctcttggaccagggccagctcaacaagtttgagtctctggagctgtgcaggcctgtt
ctgcaacagggccgcaagcagcttctagagaaatggctgaaggaggacaagctggagtgt
tcagaggagctgggagacctggtgaaagccactgacccaacactggctcttagtgtgtac
ctcagagccaacgtccccaacaaggtcattcagtgctttgcagagacgggccaattccag
aaaatagtactgtatgccaaaaaggttggctactctccagactggatctttttgttgagg
aatgtgatgcgtgtcagtccagatcagggactacagtttgcccagatgctggtccaggac
gaggagccgctggccaacatcaaccagattgtggatgttttcatggagggcagcttgatc
cagcagtgcacctcctttcttttggatgctttaaagaacaaccgccccaccgaaggacac
ttgcaaacacgtctgctggagatgaacctgatacacgcaccccaggttgcagatgcaatc
ctggggaaccagatgttcacgcactacgaccgcgctcatgtagcacagctgtgcgagaag
gcggggcttctgcagagagctctcgaacactacactgacatgtacgacatcaaacgagct
gtggtgcacacgcatctgctcaaccccgagtggctcttaaacttttttggctccttgtct
gttgaagactcgctggagtgtttgagggccatgctgtcagctaacatccggcagaacctg
cagttgtgtgtccaggtagcctcaaagtatcacgagcagctgggaactcaggcgctggta
gagctttttgagtccttcaagagttatgagggcttgttttacttcctggggtccatcgtg
aatttcagccaggagcccgatgtccacttcaagtacattcaggctgcctgtaagacgggc
caaatcaaagaggtggaaagaatctgcagggagagcaactgctatgacccagaccgggtt
aaaaacttcctcaaggaggctaagctaactgaccagcttcctctcatcattgtgtgtgat
cgctttgactttgtccatgacctggtgctgtacctctaccgcaacagtctgcaaaagtac
attgaaatctacgtgcagaaagtgaaccccagccgtctgcctgtggtgatcggtgggttg
ttggatgttgactgctcggaggatgtcatcaagaatctgatcatggtggtacgaggacag
ttttccactgatgagctggtggaggaagttgagaaaaggaacaggctaaagcttttgttg
ccatggctggagtcccgtatccatgaagggtgtgaggagccagctacccataatgctctg
gctaagatctacattgacagcaacaacacgccggagcgcttcctgaaggagaacccgttt
tatgacagcgccatcgtgggacgctactgtgagaagagagaccctcatctggcctgcgtg
gcttatgaacgaggacaatgtgacatggagctcatcaaagtttgcaatgaaaactcatta
tttaagagtgaagctcgttatctggtacgacggaaagacccagaactttgggccaaagtc
ttggatgaggacaaccctttcagaagaccgctcattgaccaggtggtacagacagctctc
tcagaaactcaggatccagaggaggtgtcggtgactgtcaaagccttcatgactgcagac
ctgcccaacgagctgattgaactcctggagaagatcgtgctcgataactctgtcttcagt
gaacacagaaacctccagaacctgctgattttgacagccatcaaggccgaccgcactcgg
gtgatggagtacgttaaccggctcgacaactacgacgctcctgatatcgcaaacatcgcc
atcagcaatgagctcttcgaagaggcgtttgctattttcaagaagtttgacgtcaacacc
tctgcaattcaggttctgatcgagcacatcggcaacttggaccgggcctatgagtttgca
gagcgctgtaatgagcctgcagtttggagccagttggggcgagcacagctgcacagagac
ttggtcaaggaggccattgactcctacattaaagctgtggacccttcagcatacatggag
gtggtaaatgcagccagcaagaacaataactgggaagatttggtcaagtttctgcagatg
gctcgaaagaaagccagagaatcgtacgtggagacggagctgatctttgctttggcgaaa
acgaaccgtctggcagagctggaagagtttgtcagtggacccaacaacgctcacatacag
caggtcggcgatagatgttatgaggagggcatgtacgaagcagccaaactgctgtacaac
aacgtgtccaactttgcccgtctggcctctacattagtccacctggaagaatatcaggca
gctgtggacagcgccaggaaggccaacagcacacggacctggaaagaggtttgctttgcg
tgcgtggatggcgaggagtttcggctggcgcagatctgcggcctgcacattgtgatccac
gccgatgagctggaggacctgatcagctactatcaggaccgtgggtacttcgaggagctg
atcgcgctgctggaggctgcgctgggtctggagcgggcccacatgggcatgttcacagag
ctcgccatcctctactccaagttcaaacagcagaaaatgagagagcatctggagctcttc
tggtccagagtcaacatcccgaaggttcttcgtgcagcggaacaggctcatttatggggc
gagctggttttcctctacgataagtacgaggagtacgacaacgccatcctcaccatgatg
aaccatccgactgatgcttggaaagaaagcctcttcaaagacatcattgctaaggtcgct
aacgtggagctgtattataaatctctgtctttctacctggaattcaaacccctcctagtc
aacgacctgctgactattttatcccctcggctggaccacagcagagcagtcaactttttt
agcaagatgaaccagctgaagctggtcaagccgtacttgaggtccgtccagagtcacaac
aataagtctgttaatgaagctctgaacgacctgctgacagaggaggaggacttccaggcc
ctgagagcctccatcgatgcgtttgacaactttgacaccatcgttctggctcagaggtta
gaaaaacacgagctgatcgagttccggcgtattgctgcttacctttacaagggaaacaac
cgctggaggcagagtgtggagctgtgcaagaaggacaaactttacaaagatgcaatgctg
tacgctgcagagtccaaggaagccgagctggcagagactctgctgcagtggttcctggag
gagggcaggagggagtgctttgccgcctgcctgttcgcctcctatgacctcctgcacccc
gacgtggtgctggagctcgcctggaggcacaacatcatggactttgcaatgccctacttc
atccaggtcatgagagaatacctcacaaaggttgatgagtttgcagcgaaggtgacggtg
gacaaactggacattgctgagagcaagaggaagactgaagaagaggtgacggagcctcag
ccaatagtgtttggccagcagctgatgctgactgcagctgccgctcctccagtggctcct
cagccagcgtacccaggctacggctaccccgccaccgccgcaggttaccccgcccaaccg
gtgtacggcttcaacatgtag
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integrated database retrieval system
