Oryzias latipes (Japanese medaka): 101155380
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Entry
101155380 CDS
T02443
Name
(RefSeq) sorting nexin-27-like isoform X1
KO
K17936
sorting nexin-27
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101155380
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ola04990
]
101155380
Membrane trafficking [BR:
ola04131
]
Protein recycling
Others
Others
101155380
Domain-containing proteins not elsewhere classified [BR:
ola04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
101155380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17_FERM_C
USP7_C2
SNX17-31_F2_FERM
RA_3
Motif
Other DBs
NCBI-GeneID:
101155380
NCBI-ProteinID:
XP_023819995
LinkDB
All DBs
Position
16:18592011..18610541
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AA seq
573 aa
AA seq
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MMADVEGQDICSPVPPLPHPTSCSGADSGNVTPDAGGGGVQTPATVTSGPRPVRIVKSDS
GYGFNVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVNVEG
ATHKQVVDLIRAGERELVLTVLSVPPQEADCLDLGDDGSAQSCYDYSDKQAVPISIPSYK
HTDLNSEKFVVYHVYMAGRQLCSKRYREFVILHQNLKREFGSFAFPKLPGKWPFSLSEQQ
LDARRRGLEEYLEKVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIAMPDKTTLTVRV
RKNSTTDQVYQAVVMKLGMDSVTASYFALFEVINHTFVRKLAPNEFPHKLYVQNYTSAIP
GTCLTLRKWLFTTKEEVLLNENLLAVSYFFHQAVDDLKKGFVKAEQKSYQLQKLAEQKKM
ATYLSLLRSCEGYNEIIFPHCSCDSRRKGHVITAISIQHFKLHACTEDGTLENQVIAFDW
AEMQRWDTDEEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERIFCELKWRKEVEEEA
TDKDNKNCSKDEYFPAAEAQTGWGYVGREIIAS
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggacgtcgagggacaagacatttgttcgccggtccctcctctgcctcaccct
acatcctgcagcggcgcggatagcggtaacgttactccagacgccggcggcggtggtgtc
cagaccccagctactgttacctcgggcccacgaccggttcgaattgtgaagtcggactcg
ggctacggtttcaatgtccggggacaagttagtgaaggagggcagctccgaagcattaac
ggggaactgtacgcgccactgcagcacgttagtgctgtcctaccggggggagccgctgac
agagcaggcatctccaagggtgacaggatcctcgaggtcaatggtgtgaacgtggaaggg
gctacgcacaagcaggtggtggatctgatccgcgccggcgagagagagctggtgctcacc
gtgctgtctgtgccgccacaggaggctgactgtctggatctgggcgacgacggatcagcc
cagtcctgttatgactactctgacaagcaagccgttcccatctccattcccagctacaaa
cacacggatctcaacagcgaaaagtttgtggtatatcatgtctacatggcagggagacag
ctgtgttccaagcgctaccgggaatttgtgattttgcaccaaaacctgaagagggaattt
ggcagttttgcatttccgaagctgcctgggaaatggccgttttctctgtcggagcagcag
ttggatgcgcgacgcagaggcttggaggaatacttggagaaagtatgctctgtacgggta
ataggagaaagcgacattatgcaggagtttttgtctgaatcagatgagaattataatggg
gtgtcagatgtggaactgagaatagcaatgcccgataaaactacactcacagtcagagtt
cgcaaaaactctacaacagaccaagtgtatcaggccgtagttatgaaacttgggatggac
agcgtaacagccagttactttgctctgtttgaggtcatcaaccacacatttgtgcgtaag
cttgcgcccaacgagttcccccacaaactatacgtacagaactatacctcagccattcct
ggaacctgcctcaccctgcggaagtggcttttcacaacaaaagaagaggttctgctcaat
gaaaacctgcttgccgtcagctacttctttcatcaggctgttgacgacttgaagaaagga
ttcgtgaaagctgaacagaagtcctaccagttacagaaactcgcagagcaaaagaaaatg
gccacgtacctgagtttgttgaggagctgtgaaggctacaatgaaatcatcttccctcac
tgttcttgcgactcccggcggaaaggccacgtaatcacagccatcagtatacagcacttc
aagctgcacgcctgtacagaagatggcacactagagaaccaggttattgcatttgactgg
gccgagatgcagaggtgggacacagatgaagagggcatggctttctgcttcgaatatgca
agaggtgaaaagaaaccgcgctgggtaaagatatttacaccatattttaactacatgcac
gagtgctttgagagaatcttctgtgagctcaagtggagaaaggaggtagaagaagaggca
acagataaggacaacaagaactgcagtaaagatgaatattttccagctgctgaggcacag
acgggatgggggtacgtaggaagagagatcatcgcctcttag
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