Oryzias latipes (Japanese medaka): 101155493
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Entry
101155493 CDS
T02443
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101155493 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101155493 (herc3)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101155493 (herc3)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
HECT type E3
101155493 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
101155493
NCBI-ProteinID:
XP_011474767
UniProt:
H2LSS1
LinkDB
All DBs
Position
1:17628583..17657987
Genome browser
AA seq
1047 aa
AA seq
DB search
MLCWGNARDGQLGIGVEGNPVFEPRICHVFSGRGLKEVACGGQHTLFLLQDGSVYTCGSN
SCGQLGHDKAGNSPELVGALDTQKITMVSCGRAHSVAVNEQGQVFVWGAGDGGQLGLETA
ETAVRIPRLLKKLCDHSISQVVCGNQHCIALSRDGQLFTWGQNSSGQLGLGKGETSKLSP
SPVKSLAGIPLAQITAGGDHCFALSLSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFLRS
QRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVSQITC
GRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPHPVKNDFLTLNLRKDLRKYTVIK
IICGGDHSFLMYSSEQCPEVPEDFRVFNVSKSLSPINHDCLNSWRLKLLYNTDSNVTKDM
IVHLSSTACWNASFLDQSDDAHFKTNPKIPGIDLNSVRMLFATLSKPAFAGIQEQATTSF
ESLLIPQLPRSPPDVEAMRIYLILSEYPALQDSKNYIRLTIPLAIAILQLDTNPSKVLDN
WWCVVDVGVFTRMVDMYKSIVVYMLTGGKTVPAPVLHENYFMATLRLLEKLHKVNLKAHH
VEYNHFYIPDITSLVDIQEDYLKWFLSKAQIKVGSSPSQSNLPPVNLCAFPFILNAQAKT
TMLQTDAELQMQMAVSGANLHNVFMLLTLEPHLARNPYLVLHVRRNHLVSDTLRELTVYS
DVDLKKPLKVIFDGEEAVDAGGLTKEFFLLLLKELMDPVYGMFTYYKESNLLWFSDKCFV
EQNWFHLIGIICGLAIYNSTVVDLHFPLALYKKLLDVSPSLEDFKELSPTEARSLQQLLD
YEGRDVEGTFLLNFAITRENYGMTEVKELVPGGESIAVDNTNRKEFVDSYLRYVFSDSVD
EQYSAFSSGFLKVCGGEILSLFQPSELMAMVVGNNNYNWEELEKNAVYKGEYSATHPTVK
LFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIIIQSTTAEEHYLPVAHTCYNLLD
MPRYQTKEILRRRLTQAVEQYEGFSLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgctgggggaatgccagagacgggcagttgggcattggtgtggaggggaatcct
gtttttgaaccaaggatctgtcatgtgttcagcggcagagggctgaaagaggttgcgtgt
ggcgggcaacacacgctgttcttactgcaagatggtagtgtatacacgtgtggttccaac
agctgtggacagctgggccatgacaaagctgggaattctccagagctggtgggggctctg
gatacccagaagattaccatggtgtcgtgtggtcgggcccattcagtcgcggtgaacgaa
cagggtcaggtgtttgtgtggggggctggagatgggggtcagcttggtttggagactgct
gagacggctgttcgaatcccaaggttgcttaaaaaactgtgtgaccacagcatctcccaa
gtagtgtgtggaaaccagcactgcatcgcactttctcgagatggccagctgttcacatgg
ggccagaacagcagcggtcagctgggtctgggcaaaggagagaccagcaagctgtctcct
tccccggtcaagtccctggcaggaatccctctggctcagataaccgcggggggagaccac
tgttttgcgctctccctgtctggagctgtgtttggctggggcaaaaacaaggctggtcag
ctggggctcaacgataaacaagatcgggccgttccatgtcacatcaagtttttgagatct
cagagagttgtttacatcagctgtggagatgaacacacagctgccctcacaaagagcggg
ggcttatttacctttggtgatggctccagggggcaactaggtcatggctccagcaataat
gaacttttacccagacgagtcatggagctcatgggaactgaagtgtcccagatcacctgt
ggaaggcatcacactcttgcctttgttccatcctctggtacggtgtatgcatttggttgt
aacagtcacggtcagctgggaacaggaatactggctgatttaagaagtccacatcccgtt
aaaaatgatttcttgactttaaatctccgaaaagatttaaggaagtatacagtgatcaaa
atcatctgtggaggagaccatagctttttaatgtattctagtgaacagtgtcctgaagtt
ccagaagacttccgagtgtttaatgtcagtaaaagcctctcccccatcaaccacgactgc
ttgaactcatggaggttaaaactgttgtacaacacagactctaatgttacaaaagacatg
atcgttcacctctcctcaaccgcttgttggaacgccagtttcttagaccaaagtgatgat
gctcacttcaaaaccaacccaaaaatccccggcatcgatctcaactctgtcagaatgctg
tttgcaacactgagcaaacccgctttcgctggaatccaggagcaggcaaccacaagtttt
gagagtctgctgatccctcagctgcctcgctccccacctgacgtggaggccatgaggatc
tatctcatcctgtccgagtacccagccctgcaggactccaagaactacatacgcctcact
atcccactggcaatagccattctccagctagacaccaaccccagcaaagtattggataac
tggtggtgtgtcgtggacgtcggcgtcttcaccagaatggtggacatgtacaagagcata
gttgtgtacatgctgacgggaggcaagacggtccctgcgcccgtgctccacgagaactat
ttcatggccacgcttagactgctggagaagctccacaaggtgaatttaaaggcccatcat
gtagaatacaaccacttttatatccctgacatcaccagcctggtggacatccaggaagac
tacctcaaatggtttctgagtaaagcccagattaaagtgggctcatctccttcacagagt
aaccttcccccagtgaacctttgtgccttcccattcatactgaatgcccaagccaagacg
acaatgctgcaaacagatgctgaactgcaaatgcagatggcagtaagcggtgcgaacctg
cacaatgttttcatgctgctcacactggaaccccacctcgctaggaacccatacctagtg
ctgcatgtgcgcaggaatcatttagtaagcgacacgcttcgagagctgactgtctactct
gacgtggaccttaaaaaaccgctcaaagtgatctttgacggcgaggaagccgtggatgcg
ggcgggttaactaaagagttcttcctgctgctcctgaaggaactcatggatcccgtctat
gggatgttcacctattacaaagagtccaatctactgtggttctcagataaatgttttgta
gagcagaactggtttcacctgatcgggatcatttgtggtcttgccatctataactccact
gtggtggacctgcactttcccctggctctctacaaaaagctgctggatgtctccccctca
ctggaggacttcaaagagctctcacccactgaagccaggagtttacagcagcttttagat
tatgaagggagagatgtggaggggacattccttctcaactttgctatcaccagggagaac
tatgggatgacggaggtcaaagagctggtccctggaggagagagcatcgctgtggacaac
accaacaggaaggagtttgtggattcttacctgcgatacgtcttctcggactctgtggat
gagcagtactcggccttctcttctggtttcctgaaagtgtgtggaggggagatcctgtcg
ctcttccagccctccgagctcatggccatggtggttggcaacaacaactacaactgggaa
gagcttgaaaagaatgctgtttacaaaggagagtactctgccactcacccaacagtgaag
ttgttttgggaggttttccacgagtttcccctggaaaagaagaagcagtttttattgttc
ctgacgggcagcgaccgcattcccatccacggcatggagagcctgcggatcatcatccag
tccaccacagcggaggagcactacctgcctgttgcccacacctgctacaacctgctggac
atgccccgctatcagaccaaagagatcctgcgccgccgcctcactcaggcggtggagcag
tacgagggattcagcctggtctga
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