Oryzias latipes (Japanese medaka): 101155512
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Entry
101155512 CDS
T02443
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ola01001
]
101155512 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101155512 (trim33)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101155512 (trim33)
Protein kinases [BR:
ola01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
101155512 (trim33)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101155512 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
PHD-1st_NSD
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
101155512
NCBI-ProteinID:
XP_023812068
UniProt:
H2L3S1
LinkDB
All DBs
Position
7:953038..977182
Genome browser
AA seq
1180 aa
AA seq
DB search
MADNKGEEDMDPTASSEPEPPAEAKSLSDSTPEKVASTTEPGSKGDADTEASGNANEAPT
PDGEASSSGEAAASTSGEANDGVGEIVSPTEPNGSNAEPAATESPAAAEASPPPAAAAAA
STPVPVPLNLLDTCAVCKESLQNRDCEPKLLPCLHSFCLKCIPQPDRQISVQVPGPHGQA
DTHIVNVMRCSICHQDYKQTDIIDNYFVKDTSEATSTADEKAAQVCTSCEDNAGTIGFCV
ECGEWLCKTCVEAHQRVKITKDHKIRTKEDADAASEPVSPSGQRPVFCPVHKQEPLKLFC
ETCDALTCRDCQLLEHKEHRYQFLEEAFQNHKCLIETNMAKLHEKNSFVHHSLSQVQHRL
KELNETHRKVEHEIKIAVFTLINEINKKGKSLLQQLENVTKERSMRLVAQHKDTTQLAQQ
ITHVLKFCSWAITSGSNTALLYSKRPIMYQLCKLFKARLEPAPQSNGVVRFFCDPNFWAK
NVVNLGNLVIEKPPPPTQPHSVMVAGPPISPGQGLPGKHPGQINLAQLRLQHMQHAAYAQ
QKQQQQQQQQQMQQQMRLASQMSQQHARQGGGGPPLVQQPPRLISMQQLQRGPGGMNGGP
GPPMYPSSHHMRLPGPPQSRMAAAQPRPNGQQYSSLMQPQLQRQMSVESEMSHQRFRFLL
QSGHSNPGHAGPFPVASLHNANPTSPTSASMAGAHAHRGPASPVIGPIELIPSVTNPENL
PCLPEIPPIQLEDAGSSNLGHILSRYITASTQLHLGAADLNTSPGLPTLSPGSSGVSNAH
TPARPSSTSSTGSRGSCSSAGRMGPGGGATADPVRVKKEPGSEDSSSCTASSLKTERGKD
SGRSACMMSSPESSPRGAASTGPDGSRGLGERIKTEPETETPCSELNGIGAASTATTSTS
TERSHGKPKLLLTNGNAGKEAETSRGGASEGNHGGREDDPNEDWCAVCINGGDLLCCDNC
PKVFHMKCHVPTIKIFPKGDFLCTFCRSLSVPEIEYCDDNKRIKGEQSLNPEDQRRCERV
LLYIFCHELSMGFREPVPSSVPNYYKIIKQPMDLKKVKKKLQLRSSQYYKSVQEFVSDMR
LIFKNCAEYNEMSRIIQVYDEEKEINPQAGSEMAISGKAVGLYFEEKLQEMFPGQNFPET
PEAEPPDEKEREEETEDSEDDFIQPRRKRLKTDEKVVHIK
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggcggataacaaaggcgaagaggatatggatccgactgcgagctcggagccagaacct
cccgcggaagcgaaaagcctctcggactcgacaccagagaaagtggcctcaacaacggaa
ccgggttctaagggggacgcggacaccgaagcgtccggtaacgctaacgaggcaccgaca
cccgacggtgaagctagcagcagcggcgaggctgccgcctctactagcggggaagcgaac
gatggcgtcggcgagatcgttagcccgaccgagcccaacggctccaacgcggagccggcg
gcgacggagtctcctgccgccgccgaggcgtccccccctccggccgccgccgcagcagcc
tccacaccggtccccgtcccgctgaatctgctggatacgtgcgcggtgtgtaaagaaagc
ctccagaaccgggactgtgagcccaaactgctgccctgcctgcactccttctgcctgaag
tgcatcccgcaaccggacaggcagatcagcgtccaggtcccgggcccgcacggacaggcc
gacacgcacatagtaaacgtcatgcgatgttccatttgccaccaggactacaagcagaca
gacatcattgacaactactttgttaaagacaccagcgaagccaccagcacggcggacgaa
aaagccgcacaggtttgcaccagttgtgaagacaacgctgggaccatcggcttctgtgtg
gagtgtggggagtggctgtgtaagacctgcgtggaggcccaccagagggtcaagatcacc
aaggaccacaaaatccgcacaaaggaggacgccgacgccgcttctgaacctgtcagcccc
tcaggacagaggccggtcttctgtccggtccacaaacaggaaccgctcaaacttttctgt
gagacgtgtgacgctctgacctgcagagactgccagctgctggagcacaaagagcacagg
taccagtttctggaagaagcctttcagaaccacaagtgtctcattgagaccaacatggcc
aagctccacgagaagaacagttttgtccaccattctctgtctcaggtgcagcacaggtta
aaggagctgaatgagacgcacaggaaggtggagcacgagatcaaaatcgccgtttttaca
cttattaatgagatcaacaaaaagggcaagtccctgttgcagcagctggagaatgtgacc
aaagagcggagcatgcggctcgtggcgcagcataaagacaccacccagctggctcagcag
atcacccacgttctcaagttctgcagctgggccatcacgtcgggcagcaacacggcgctg
ctgtacagcaagaggccgatcatgtaccagctttgtaagctctttaaggccagactggaa
ccggccccccagtccaacggggtggtgcgcttcttctgtgaccccaacttctgggccaaa
aatgtggtgaatttaggtaatctggtcattgagaaaccccccccaccgacacagccccac
agtgtgatggtggcgggaccccccatctcaccgggtcagggtctccccggcaaacacccg
ggtcagatcaacctggctcagctgcggctgcagcacatgcagcatgcggcctacgcgcag
cagaagcagcagcagcagcagcagcagcagcagatgcagcagcagatgcggttggcctct
cagatgtcccagcagcacgcccggcagggcgggggcggcccccccctggttcagcagccc
ccgcgactcatcagtatgcagcagcttcagcgaggacccgggggcatgaacggggggccc
ggcccccccatgtacccttcctcccatcacatgcgcctgcccggccccccccagagccgg
atggcggcggctcagcccagacccaacggccagcagtattcctccctgatgcagcctcag
ttacagagacagatgtctgtagaatctgagatgagccaccaaaggtttcgtttcttactt
caatcagggcattccaacccggggcatgctggtcccttcccggtggcatctttgcataac
gccaaccccaccagtcccaccagtgccagcatggcaggagcccacgctcaccgcggaccc
gccagcccggtcatcggccccatcgagctgatcccctccgtcaccaaccccgagaacctt
ccctgccttccagagatcccacccattcagctggaagacgcaggttccagtaaccttgga
cacatcctgtctcgttacatcacggcgagcacgcagcttcacctgggcgccgccgacctg
aacacgtctccagggttacccactctgtctcccgggtcctcgggtgtgtccaacgctcac
acgccagcacggccctccagcacatccagcacaggaagcaggggcagctgtagttctgcg
ggaaggatgggacctggaggcggagccactgcagacccggtcagagtgaagaaggagccg
ggttcagaggacagttccagctgcacggcgtcgtctctgaagacggagcggggcaaagac
tctggcaggagtgcctgcatgatgagcagtccagagagcagcccgcggggggccgcatcc
acgggcccggacggttccaggggactcggggagcggatcaaaaccgagccagagacggag
acaccgtgttctgagctgaacggcatcggcgccgcctccaccgcaaccacgtctacctcc
acggagcgcagccacggcaagcccaagcttctgctcaccaacgggaacgcaggcaaggag
gcggagaccagcaggggcggagcatctgaggggaaccatgggggcagagaggacgacccc
aacgaagactggtgcgcagtctgcatcaacgggggcgacctcctctgctgtgacaactgc
cccaaagtgttccacatgaaatgccacgtccccaccatcaaaatcttccccaagggggac
tttctctgcactttctgccggagtctgagcgtccctgaaatcgagtactgtgacgacaac
aaaagaatcaaaggggagcagagcctgaaccctgaagaccaacggagatgtgagcgcgtc
ctgctgtacatcttctgtcatgagctcagcatgggcttcagggaacccgttcccagctct
gtgcccaactactacaagatcattaagcagcccatggacctgaagaaggtgaagaagaag
ctgcagttacggagctcccagtactacaaatctgtccaggagtttgtgtcggacatgcgc
cttatcttcaaaaactgtgcggagtacaatgagatgtctcgaataatccaggtttatgat
gaggagaaagagattaatccacaggccgggtcggagatggccatttccgggaaggcggtg
ggtctgtactttgaggagaagctgcaggagatgttcccgggccagaacttccccgaaact
ccagaagccgagcccccggatgagaaggagcgggaggaggagacggaggactcggaggac
gacttcatacagccccgacgcaagcggttgaaaacggacgagaaggtggtccacatcaaa
tag
DBGET
integrated database retrieval system
