Oryzias latipes (Japanese medaka): 101155617
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Entry
101155617 CDS
T02443
Symbol
srek1
Name
(RefSeq) splicing regulatory glutamine/lysine-rich protein 1 isoform X2
KO
K13165
splicing regulatory glutamine/lysine-rich protein 1
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101155617 (srek1)
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
101155617 (srek1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
101155617
NCBI-ProteinID:
XP_011479776
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Position
12:complement(4415725..4427682)
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AA seq
458 aa
AA seq
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MSGIPGTTVVQVTNLSSAVSSEQMRTLFGFLGDIEELRLYPPDNTTLNFSSKVCYIKYRE
PSSVGVAQHLTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPVPPVPSLIPGGGLLPIPT
PSPLQNLNLPLVNRISAGLSPTSSVIAQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTAD
QLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARALTFNGVMFGDRPLKVNHSN
NAIVKPPELTPQAAAKELESVMKRVREAQVTIAAAIEPEAKTHSSGRCPRMRRSRSRSHS
HSRSHRKRSRSKHRSSQRSWQGGDTHSSRSGHRRRSRSKDKRHARSRSRGHKRRSKERSR
SPRRKPRSPSPKRGKREKRRERSRDRKERSTSRKRSRRDGDRMKNRPKTAKVEENYSRAK
KAYVSDREDSPSHSEDMTPPPCVQHNGSYKTRSEDGSK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggatacctgggactaccgtcgtccaggtcaccaatctgtcctcggctgtgagc
agcgagcaaatgcgaaccctgttcggttttttaggagacatcgaggagctgcgcctctat
ccgcccgacaacacaactctgaatttttcatccaaagtgtgttacataaagtatcgagag
ccttccagtgttggtgtggcgcaacatctgaccaacactgtttttattgacagagctttg
atagtagtcccatgtgctgaaggaaaaatcccagaagaggccaaggctctgtctctcttg
gcacccgtcccccccgtgcccagtctgattcctggcggaggtttgctgccaattccgact
ccaagtccccttcaaaatctaaacctccctttagtgaatcgcatttccgctggcctcagc
cccacgtcttcggtgatcgcccagccgcctctcatgggaaacgtcgatccctccaaaatc
gatgagatcaggaggacagtttatgttggcaacttgaactcacagacgaccaccgcagac
cagctgctggagttcttcaagcaggtgggagatgtgaagtttgtgcggatggccggagac
gagacccaaccgacgcgcttcgccttcgtggagttcgtggagcaggactccgtcgccaga
gccctgaccttcaacggagtcatgtttggagacagacctctcaaggtcaatcattccaac
aacgccatcgtgaagcctccagagctgacgccacaggctgccgccaaggaactggagagt
gtgatgaagagggtgagggaagctcaggtcaccatcgccgctgccatagagccagaggca
aagacgcactcgtccggtcgctgtccgaggatgcggcgctcccgttcgcgctcacactcg
cactcgagatcacacaggaagaggtctcgttcgaaacaccgatcttcacagaggtcgtgg
caaggcggggacactcacagttccagaagcggccacaggcggcgctctcgctctaaagac
aaaaggcacgcccggagtcgctccagaggccacaaaaggaggagtaaggagcggtccagg
agccccagaaggaaacccagatccccctcacccaaacgcggtaagagggagaagaggagg
gagcgcagccgggacaggaaggagcgctccacgtccaggaagaggagccgcagagacggc
gacaggatgaagaacagacccaaaacggccaaggtggaggaaaactacagccgagccaag
aaggcgtatgtgagcgacagagaggactccccctcacacagcgaggacatgactccgccc
ccctgcgtccagcacaacggcagctacaagactcggagcgaagacggcagcaagtga
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