Oryzias latipes (Japanese medaka): 101155621
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Entry
101155621 CDS
T02443
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101155621 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101155621 (snrpa)
Spliceosome [BR:
ola03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
101155621 (snrpa)
Complex B
101155621 (snrpa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
101155621
NCBI-ProteinID:
XP_004075429
UniProt:
A0A3B3I158
A0A3P9K296
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All DBs
Position
13:13959687..13962027
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AA seq
272 aa
AA seq
DB search
MTTPEVRPNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVARTLKMKGQAFVIFK
EINSASNALRSMQGFPFYDKPMRIQYSKTDSDIIAKMKGTYVERERKKEKRKPKPEGTGA
KKAAAAAMMAGVPTAMPGMPPMSQAPRMMHIPGQPAYMPPPGMMPPPGMAPGQIPPGAMG
QMMPGQMPQQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPGRHDIAFVE
FDNEVQAGAARDSLQGFKITQTHAMKISFAKK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccactccagaagtacgacccaatcacaccatatatatcaacaacttgaacgaaaaa
attaagaaagatgaactgaagaagtcactgtacgccatcttctcgcaattcggtcaaatt
ttggacatcctcgtcgcacgaaccctgaagatgaagggtcaggcctttgttatcttcaaa
gagatcaacagcgcctcaaatgcactgaggtccatgcaggggttccctttctatgataaa
cccatgcgcattcagtattccaaaacagactcggacatcatagcaaaaatgaaaggaacc
tatgtggaacgtgagcgcaaaaaggagaagaggaagcccaagcctgaaggaacaggagct
aagaaagctgctgctgcagccatgatggctggtgtgcctactgctatgcctggaatgcct
cctatgagccaagctccccgtatgatgcatattccaggccagccggcctacatgcctcct
ccaggcatgatgcctcccccaggaatggcgcctggccagatccccccaggtgcaatgggt
cagatgatgcctggccaaatgcctcagcaggttgcagaaaatccaccgaatcacatcctc
ttcctcaccaacctgccagaggagacgaacgagctgatgctctccatgctctttaaccag
ttccctggctttaaagaggtgcgtctggtccctggtcgccatgacatcgcctttgtggag
tttgataatgaggttcaggctggagctgcacgagattcactacagggattcaaaatcaca
cagactcatgcaatgaagatctcatttgccaagaaataa
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