Oryzias latipes (Japanese medaka): 101155690
Help
Entry
101155690 CDS
T02443
Symbol
rnf25
Name
(RefSeq) E3 ubiquitin-protein ligase RNF25 isoform X2
KO
K10640
E3 ubiquitin-protein ligase RNF25 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101155690 (rnf25)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101155690 (rnf25)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101155690 (rnf25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RWD
zf-RING_11
zf-RING_2
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-C3HC4
zf-rbx1
zf-ANAPC11
Rua1_C
DUF1644
Motif
Other DBs
NCBI-GeneID:
101155690
NCBI-ProteinID:
XP_004071165
UniProt:
H2L6D6
LinkDB
All DBs
Position
8:2386523..2390804
Genome browser
AA seq
465 aa
AA seq
DB search
MMAVESDVQSEIEVLQSIYLEDLQVDRKQDGGWEVSLVLHPSTGQDAVSQFVRLTLTLTL
DQQYPCSPPVISIRNPRGLSDDKLSSVQACLQLEAASCLGSPVLYQLIEKAKEILTESNI
PHGNCVICLYDFKEGEAFTKTSCYHYFHSHCLGRYVRHSEAELQQRERELEEDKTRERAE
HQELTVVCPVCRETLTYDLDLLLSSPAPQLPEFHGEAFGADFQQKWEELQRILEKQRSKG
GIIDPEVESNRFLIHINEAPPAAEDGNQEAEVPPDVPVSSSNESSVRADPFPPGKSHSRG
VQGQRRQNQMRGPRRGGRTRPQHPRAAPITEHLDKLSLSSEAPLRTKAPLGSEQWAHRDP
DSGRSRTDEEESAAQQEMQLLPDHQASLQSAVESECLKDCAGSAGGRSHSGRRRGPYRPT
QHAGPPGLGRHHWDGRAARSRGGHHRGHGRGFQQRVVERGREEVL
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgtggagagcgatgttcagtcggagatcgaggtgctgcagtccatttacctg
gaggacctgcaggtggaccggaagcaggacggaggctgggaggtgagtctggtgctgcac
ccgtcgacaggacaggacgccgtctctcagtttgtgcgtctcaccctgacgctgaccctg
gatcagcagtacccctgctcccctccggtcatctccatccgtaacccccgcggcctgtcc
gatgacaaactcagcagcgtgcaggcgtgtcttcagctggaggccgcgtcgtgtctgggt
tctcccgtcttataccagctcatcgagaaagcgaaagagatcctgactgagagcaacatt
cctcatggaaactgcgtcatatgtctttacgattttaaggagggggaggccttcaccaag
accagctgctaccactacttccactcccactgcctcggccgctacgtccgccactcggag
gcggagctccagcagagggagagggagctggaggaggacaagacccgagagcgagcggag
caccaggagctgaccgtggtgtgtccggtgtgcagagagactctgacctacgacctcgac
ctccttctgtcgtctcccgcccctcagctgcccgagttccacggcgaggcgttcggcgca
gactttcagcagaagtgggaggagctccagaggatcctggaaaagcagaggtctaaagga
ggcatcattgacccggaggtggagtccaaccgcttcctgattcacatcaacgaggctcca
cctgctgctgaagatggaaaccaggaggctgaagttcctccagacgtcccggtgtcctcc
tccaatgaaagcagcgtgcgagcggatccgtttcctcctggaaagtcccactccagagga
gttcagggccagagacgtcagaaccagatgagggggccgaggagaggaggcaggaccagg
ccgcagcatccgagagctgcccccatcacggagcacctggacaaactctctctgtcctct
gaagcacctttgaggaccaaagctccgctcggttctgaacagtgggcgcacagggaccca
gactcgggccgatccaggacagacgaagaggaatctgcagcgcaacaggagatgcagctt
ttgcccgaccatcaggcctcgctccaatccgccgtggaatccgaatgcttaaaggactgc
gcaggctccgctggtggccgcagccatagtggaaggaggaggggtccttatcgacccacc
cagcacgccgggcctcctggactcgggcgccatcactgggacggtcgagctgcgagaagc
agaggcggacaccaccggggtcacggcaggggtttccagcagagggtggtggagagggga
agggaggaggtgctatga
DBGET
integrated database retrieval system
