Oryzias latipes (Japanese medaka): 101155829
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Entry
101155829 CDS
T02443
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
101155829
Cilium and associated proteins [BR:
ola03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
101155829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
Motif
Other DBs
NCBI-GeneID:
101155829
NCBI-ProteinID:
XP_011477883
LinkDB
All DBs
Position
1:complement(29746854..29767948)
Genome browser
AA seq
1673 aa
AA seq
DB search
MIERMESGVFLNCLDQFMLSPLVTWVKTLAPDDGGEHLDFSDLLDGVFLNNIMAQLNPPA
APRVVSKVCRDPSQRIQNLNFLVQQIKTYYLDNLRQLIAIPLPDVLLLGRTPYCEQSLDE
MKKLLLLLLGCAVQCDEKEEYIEKIQTLDFDTKAAIAAHIQELTHSQDNVLDLQQLESGD
MHPEEMEAAVRTVATCLRHLLEQRDAHLEAIAELMQEKEAAGGSLCGPSRPLPAGYSPSM
QQQQVGTQQHLVVDLADSKAKIRRLRQELEERREQMLDCRHELENMEAQLKRIQQENSRL
LVDARSARTYRDELDALRERAMKADKLESEVARYREQLHKMELYKAKVEELKEDNRVLVE
TKDVLEDQLESWRARTDKIHQLEKHILLLKAQVQDMEQEREVDRKCIKELQEENLALCLA
QRRSMDESQLLGWELEQLSKTSESSQGQQTFSEEVTERTRSQLLKLEKENQSLLRTIEEL
STKSKESSHQMCSFTDFNGSKQACCSVTENSELLVNGGSNCHQDLYAETRTHPFNTADCC
RLESRQLEDAGAGKDLQETMSDLEALENVHNGLHALDGSETPNGSRLHHDGIFTGLPARS
SYANKHTQRLEAKVRALDAVNLQLQTSLDSSDRKVALLEEEVQELEAENQTLQTSLEELQ
ISVRRLEQLESEKQSLEQETASLEKNKRHLEKENRRLRQQVEILEANLDNSNVCMSSLER
EMRGVVKEVEGLRETAERVKNLEVDNRQLAKQAAIDQKTLATLRQELVNEKMSTQQRDAE
LRRRTHELEMRVLNQESAEQPEAHTSDGRVKMLELESSLKKSLQDTDDQMLEARLREASS
FNQQLCHELKTVKLSCDALQQTQEEWSSSSSEAESCKAVSKWLQESQEATKELLRVKDHL
IKVERNNATLEAEQQAVQVQLKQLEGQSHIQQVQILALQRQAASLQENNTALQTHNASLQ
VEMSTLNSQSAALTAQNAQLQQQQSRTESERDGVVRERDELRSSHEQLLRDHERLVVLHE
RQAMEYEALMGKHKCLKNTHRTLELEHRTLQDRCNSLLQQRTKLEDLERALKEEQMRIGL
EKEQHQSTAAECSRLRDEKDWLNQVYCQLVKDNEALTADHKQLKTQMNEIKLEKTWLEAD
FSKLKTELQQLDITSMKLSNQCELLSQLKENLDEENRHLLSQIKTLMLQNRTLLEQNMES
KDLFHVEERQYIDKLNDLRRQKEKLEEKIMDQYKLYEPSPPRRRGNWITLKLRKLMRSGS
RELEPAGLAEPHVCSQESGSFISSDGSGGSASAALPQHSTPLKKFPRLKSRLKDRDRVKF
LFRRSTCKDSNASSLPSGCEDNDMAQNHGVQSRAQSESSGEFSLSLENEPWSNGSSPIQQ
PPSRRSSSSNQPPSDTSTHQWDMKLQGCSQRASPVSNHHSQNTDNQSVQTQLDPVPPQDF
WLSRGTKTIRRGSRGKFPRRSSDLGAKTNSGLKRVGSKSETAQSSACSPITVLYVQGKSS
SMSGCLNCFSAPLVKERPLKGPGAPGSLPRASNVISTAEGSSRRSSLSSRGTCRTGPQQV
STEEPQTPPGPVPPLKPPRDPAVLLPSEQHKAPVQESLGSPFTFTSVFSNTIFSDAVANT
NCLDGLSADQIFLSPNPTQTCPPESQTSSESGSQTLLGSERQQSENAAAQKDA
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atgatagagagaatggagagcggagttttcctgaactgtctggatcagttcatgctcagt
ccacttgtcacttgggtgaagacacttgcgcctgatgatgggggcgagcatttggacttc
tcggacctgctggatggagtcttcctgaacaacatcatggctcagctaaatcctcctgct
gcacctcgagttgtgagcaaagtctgcagggatccgagtcaaaggattcagaacctgaac
ttccttgtgcagcaaatcaagacgtattatctggacaatctgagacagttaatcgcaatc
cctctgccggacgtgctgctgctcggcaggacgccatactgtgaacaaagtctggatgaa
atgaagaagcttctgctgctgttgctgggatgtgccgtccagtgtgacgaaaaagaggaa
tacatagagaagattcagacgcttgattttgatacgaaagctgcaattgctgcacatatt
caagagttgactcacagtcaggacaatgtgctggacctgcagcagctggagtctggtgac
atgcacccagaggagatggaggcagcagtgaggaccgtggccacatgtctccgacatttg
ctggagcagagggatgctcatctggaggctatagcagagctcatgcaggaaaaggaggcg
gctggaggttcgctctgcggcccctccaggcccctgcctgccggctactctcccagcatg
caacagcagcaggttggaacccagcagcacctggtggtggatctggcagactcaaaggca
aagatcagacgacttagacaagaactagaggagaggagagagcagatgctcgactgcaga
catgagctagagaacatggaagcccagctgaagaggatccagcaggagaattcccggctg
ctcgtggacgctcgctctgcccggacgtaccgcgacgagctggatgccctgagggagagg
gccatgaaggcggacaagctggagagcgaagtggcgagataccgggagcagctgcacaag
atggagctgtacaaggccaaagtggaggagctaaaggaggacaacagggttctggtggag
accaaggacgtgttggaggatcagctggaaagctggagggctcgcacagacaaaatccac
cagctggagaagcacatcctgctgctgaaggcccaggtccaggacatggagcaggagagg
gaggtagacaggaagtgcatcaaggagcttcaggaggagaacctggctctgtgtttggct
cagaggagaagcatggacgagtctcaactcttgggctgggagctggagcagctgtccaag
acatcggaaagctcgcaggggcagcagactttcagcgaagaggtcactgagaggactcgc
agtcagctgctgaagctggagaaggagaaccaaagtctccttaggaccatagaggagctc
agcaccaaaagcaaagaaagttctcaccagatgtgcagcttcactgacttcaacggatca
aagcaagcctgctgctctgtcacagaaaactcagagctgctcgtgaacggagggtcaaac
tgccatcaggacctctatgcagaaacacggacccacccttttaacactgcagactgttgt
cggctggagagcagacagctggaggatgcaggtgctgggaaggatttacaagaaaccatg
tcggatctggaagccttggaaaatgttcacaatggtctgcatgctttggatggatcagag
accccaaatggcagcaggcttcatcatgacggcatcttcacgggtctgccagctcgctcc
tcctatgccaacaagcacacacagcggctggaggccaaggtcagggctttggatgcagtt
aatctgcagctacagacgtctctggacagctcagatcgaaaggttgcacttttggaggag
gaggttcaggagctggaagcagagaaccagaccctgcagacttccttagaggaacttcag
atctctgtgagacgcctggagcagctagaatctgaaaagcagagtctggagcaggaaacg
gcctccttggaaaagaacaagcgccacctggagaaggagaaccggcggctccggcagcag
gtggaaattctggaggcgaacttagacaacagcaatgtgtgcatgagcagcttggagaga
gagatgcgtggtgtggtgaaggaggtggaggggctaagggaaacagctgagagggtcaaa
aacctggaggtagataacagacagctggccaagcaagctgccatcgaccagaaaacgttg
gcaacgctcaggcaggagctggtgaatgagaagatgagcacccagcagagagatgcggag
ctgcggaggcggacacatgagctggagatgagagtcctgaaccaggagagcgcagagcag
ccagaagcacacacatcggatggcagggtcaaaatgctggagctggagtcttctctcaag
aagtctctgcaagatacagatgaccagatgctggaagcacgtctgagggaagcttcctcc
ttcaatcagcaactgtgccacgagctgaagactgtgaagctgagctgcgacgccttgcag
cagacacaagaggagtggtccagctccagctctgaggctgagagctgcaaagctgtgagc
aaatggctgcaagaaagccaggaggccactaaggagctgctcagggtcaaagaccacctg
ataaaggtcgagagaaataatgcaacgctggaggcggagcagcaggctgtgcaggtgcag
ctgaagcagctggaaggtcagagtcacatccagcaggtgcagatattagccctgcagagg
caggcggcctccctgcaggagaacaacaccgccctgcagacacacaatgctagcctacag
gtggagatgtccactctaaattcccagagtgcggcccttacggcccaaaacgctcagctc
cagcagcagcagtccaggactgagagtgagcgggacggtgtggtgcgagagcgcgacgag
ctgcgcagctctcatgagcagctgctgcgggaccacgagcgtctggtggttctgcatgaa
cggcaggccatggagtacgaggccctgatgggcaaacacaagtgtctgaagaacacccat
cggacgctggagctagagcatcgcacactgcaggacagatgtaatagcctgctgcagcag
cgtacaaagctggaggacctggagagagccttaaaggaagagcagatgaggataggtctg
gagaaggagcagcaccagagcacggctgctgagtgcagcaggctgcgcgatgagaaggac
tggctcaaccaagtttactgtcagctcgtgaaggacaacgaggctctgacagcagaccat
aagcagcttaagacccagatgaacgagatcaagctggagaagacttggctggaggcagac
ttctccaagctgaagacggagctgcagcagctggacatcacctccatgaagctctccaac
cagtgtgagcttctgagtcagctaaaggaaaacctcgatgaagagaaccggcacctgctg
agccaaatcaagaccctgatgctgcagaaccggaccttgttggagcagaacatggagagc
aaagatctgtttcatgttgaggagcggcagtacatagataagctgaatgatttacggagg
cagaaggagaagctggaggaaaagataatggaccagtacaagttgtacgagccgtcacct
cctcgcagacgggggaactggataaccctaaagcttaggaagttgatgagatccggcagc
cgcgagctggaacctgcaggcctggctgagccacacgtctgctctcaggagagcggctcc
ttcatcagctctgacggctctggaggctccgcctccgccgccctgccccagcacagcact
cctctgaaaaagtttccccgtttgaagagcaggctgaaggacagagacagagtcaagttc
ctcttccgtcgctccacgtgcaaagattccaatgccagcagcttaccatctggatgtgag
gacaacgacatggcgcagaatcacggagtccaaagtcgagcccaaagtgagagcagtggt
gagttcagcctgagcctggaaaatgagccgtggtcgaatggcagcagtcccatccagcaa
cctccttctcgccgctcctcctcctccaaccaaccacccagtgacacctccacccaccaa
tgggacatgaagctgcagggctgcagccaaagggcctctcctgtgtccaatcaccactct
cagaacacagataaccagtctgttcaaactcagctggatcctgtgccgcctcaggatttc
tggctcagcagaggcacaaaaaccatccggaggggatccagagggaaatttccacgtcgg
tcatcagatttaggggccaaaactaactctgggcttaaaagggtgggctcaaaatctgaa
actgcccagtcttctgcctgttctccaatcacagtgctgtatgttcagggaaagtcatct
tcaatgtctggctgcctcaactgcttctctgcgcctctggttaaggaaagaccgctcaag
gggcccggggcccctggcagtctcccacgcgccagcaacgtcatctccacagcagagggc
tcgtcccgccgctccagcctcagcagcaggggcacatgcaggaccgggcctcagcaggtt
tcaacagaggagccgcagacgccacctggacccgttcctccactcaaaccacccagggat
cccgctgttcttcttccatctgaacagcacaaagctcccgtgcaggagtcacttggctct
ccgttcactttcacatctgtcttttcaaacacgatcttcagcgatgcagtggcgaacaca
aactgcctggacgggctcagcgctgatcaaatcttcctcagcccaaacccgactcagact
tgtcctcctgagagccagacgtcttctgaaagcgggtcacagacgctgcttggttctgag
aggcagcagagtgagaatgcagcggctcagaaggacgcatga
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integrated database retrieval system