Oryzias latipes (Japanese medaka): 101155906
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Entry
101155906 CDS
T02443
Symbol
usp43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ola01002
]
101155906 (usp43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101155906 (usp43)
Enzymes [BR:
ola01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
101155906 (usp43)
Peptidases and inhibitors [BR:
ola01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
101155906 (usp43)
Ubiquitin system [BR:
ola04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
101155906 (usp43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
101155906
NCBI-ProteinID:
XP_011472138
UniProt:
H2LDK4
LinkDB
All DBs
Position
1:9150553..9274381
Genome browser
AA seq
1216 aa
AA seq
DB search
MESRKDSKHRKQPMKAKTSKRKEKKSKSGPFTRRKSLRSFGNFMGRILKTLGSLAHADNA
EPRDADDDDGGFGRSTSAHLKSDFSHSSRDGTAKKNSVVSSAHGSVKERLSWCYGDKTPG
VLGLKNHGNTCFMNAVVQCLSNTDLLAEYLGLEQYKSDICQGRVNGEERGEEPQAVRGEV
TEQLAALIRALWTLEYTPQLSVDFKSIVAKYSSQFRGNSQHDALEFLLWLLDRVHEDANT
NPDNGNNSNKTKANTRGTSSSEDRLNPSTQQPRSRHSFVQEHFQAQYRSSLTCPHCLKQS
NTFDPFLCISLPIPLRQTRALCVTLVFSAKGQRYVRVGLAVPLFGSISTLRTMTAAEGNI
APDQVILAELYSTGFQRSFSDEDELTMIADSDVVYAFQAPPVSNRGGLTPHSVYHHSLPS
SPHSSTTGAAGQKLPQSGRLSSEYLNHSSSSKVILLMCNTVGSGQHAARFGPPFLMVEDR
TVSWDQLTQSILSNLYYLMANASQSQTAGVLFKIRVVGSSAAYSYLSPQDSRPLCHPAVD
RALKLCGPGGPLHVKLVIEWERSTKEHLFGSIQEEVVQDAESVRNQQQQHLQQHSCTLDE
CFQLYTKEEQLAPDDAWKCPHCKQLQQGMVKMNLWTLPDILILHLKRFRQVGERRNKLST
LVGFPLTGLDMAPHVVKRSQSMKNLHQGSSQTNRRPSSGQHQRSDIMLARDYLYDLYAVC
NHHGGMHGGHYTAYCRNSVDALWYSYDDSSVDLVPEEEVCTKGAYILFYQRRNVIPPWSA
NSSVRGSTSSSLSDHWLIRLTEDSKRGSTVSRSSTACASLVPDSPESTVFHDNVFKDAHG
GFESRPFVRGLQGRSVSMRVPNKSKDTMSKVLPLRWSFGSKDRRKNDQVPPVDPDPAELV
QYLESGRRPRCTKDSIVALMNEPRSTKEAAKGRAADNTRSSSGGSISCVGKVRDEPFYTK
VPEGQKPPIEKNSSRTEGSHSKEESKVNISSSSSSNTLTRKKDSRRYSSSKSSKDALTKE
SSEAGVHPSYSSPNLHGTLTRRKGDKAKKDRDGTHEENPKAKKGELPKSQEGLLSFFKGN
FLKKDKDANKSNESDSGRVEGKDGSRKTSLTVPMSNGVAGSRTRLEESKSNGSRHQSEGL
ANGKVGRTPTDIRRSQSSSNITTKPEQNMRRTASLHRNAVSTTPRTADKQSHSTLQRDRY
STTSLGRKKNVPESSF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atggagagccgcaaagacagcaagcacagaaaacagccgatgaaagccaaaacctccaag
cggaaggagaagaaatccaaaagtggccccttcaccaggaggaaatcgctgcgctcgttc
gggaatttcatgggcaggatcctgaaaactttgggcagtttggcgcacgccgacaacgcg
gaaccgcgggacgcggacgacgacgacggggggttcggacgcagcacttcggcccatttg
aaaagcgacttttcccacagctccagggacggaaccgcgaaaaagaactccgtggtctcc
tccgctcacggctcggtgaaagagaggctgtcatggtgctacggcgacaagactccagga
gtgctggggctgaagaaccacggcaacacctgcttcatgaacgctgtggtgcagtgtctc
agcaacacggacctgctggccgagtacctcggcttggagcaatacaaatcggacatttgc
cagggtagggtgaacggggaggagaggggagaggagccgcaggccgtcaggggagaagtg
accgagcagctggcggcgctgatccgcgcgctctggacgctggagtacacgccgcagctc
tccgtggacttcaagagcattgtggccaaatacagctctcagttccggggaaactctcag
cacgatgctcttgagtttcttctctggcttttggacagagttcacgaagacgccaacacc
aaccctgacaacggcaacaacagcaacaagaccaaagccaacaccagggggaccagttct
tccgaagaccgtttgaatcccagcacacaacaacctcggagtcgacacagttttgttcag
gagcatttccaggcccaatacaggtcttctctgacgtgcccccattgccttaagcagagc
aacacttttgacccgtttttatgcatctctcttcctattcccctgcggcaaaccagagcc
ttatgtgtgacgctggtgttcagtgccaagggtcagaggtatgtgagggtggggctcgct
gtgcctctgtttggctccatctccaccctgagaactatgacggcggctgagggcaacatc
gcccccgatcaggttattcttgcggaactctactccaccggtttccagcgctctttctca
gacgaggatgaactgaccatgattgctgacagcgacgtcgtctacgctttccaagctcct
cccgtttccaatcgtggcggcttaactccgcactcagtgtatcatcacagcctcccctcc
tctcctcactcctccacgactggggctgcaggtcagaagttacctcagtctggacgcctc
tcctcggagtacctgaaccacagcagctcctccaaggtcatcctgctcatgtgcaacaca
gtagggtctggccagcacgctgccagatttggacctccatttctcatggttgaagacagg
accgtgtcctgggatcagctgacgcagagcatccttagcaatctgtactacctgatggcc
aacgcatctcagtctcagacggctggtgtgctgttcaagatcagggtcgtggggtcctct
gcagcctacagctacctgtccccacaggacagcaggccgttgtgtcaccctgcagtggac
agagctttgaagttgtgtggccccggaggacctctccacgtgaagcttgtgatcgagtgg
gagcgcagcactaaagaacacctttttggcagcatccaggaggaggtggtgcaggacgcc
gagagtgtgaggaaccagcagcagcaacaccttcagcagcatagctgcactttagacgaa
tgcttccagctctacaccaaagaggaacagcttgctccggatgatgcgtggaagtgccct
cactgtaagcagcttcagcagggcatggtgaagatgaacctgtggacactgccggatata
ctgatcctccacctcaagcgcttccgacaggtcggcgagcgaaggaacaagctctctacc
ttggtggggttccccttgacgggtctcgacatggctccacacgtggtgaagagaagtcag
agcatgaagaaccttcatcagggatcatctcagactaaccggaggccgtcttcaggccaa
caccagcgatctgacataatgcttgcgcgtgactacctctatgatctgtacgccgtctgc
aaccatcacggaggaatgcatggagggcactacactgcatactgcaggaattcagtggat
gccttgtggtacagttatgatgacagcagtgtagaccttgtacctgaggaggaagtttgc
accaaaggagcctatatacttttctaccagaggcgcaacgtcattccaccatggtcagca
aacagctctgtcagagggtccacaagttcatctttgtccgaccactggctcatcaggctg
acggaagacagcaaaagaggcagcaccgtgtctcgttcatcaacggcctgcgcttctctc
gtgcccgactctccagaatccacagtcttccatgacaacgttttcaaagatgcacatgga
ggctttgagagcaggccatttgttaggggtctccagggacgaagtgtgagcatgagggtc
cccaacaagagcaaagacaccatgagcaaagtgcttcccttgcgctggtcttttggttcc
aaggacagacgaaagaatgaccaagtgcctcctgtagaccctgatcctgcagagcttgtc
cagtacttggaatctggtcggagacctcgctgcacaaaggattccatagtagcacttatg
aatgagccacgtagcacaaaggaggccgccaaaggccgagctgcagacaacacaaggtct
tccagcggtgggagcataagttgtgtgggtaaggtcagggacgagcctttttatacaaag
gtcccggagggccagaagcccccaatagaaaagaattctagtcgaactgaaggtagtcac
tcaaaagaagaaagcaaagtaaacatcagttctagctccagcagcaataccctcactagg
aagaaggattcaaggagatacagctcttccaaatcttcaaaagatgcactgacaaaagaa
agctctgaagctggggtccatcccagctacagctcacctaacctacatgggacgctgaca
agacgaaaaggggataaagctaaaaaggatcgagatggcacccatgaagaaaaccctaaa
gccaagaaaggagagttgcccaagagtcaagagggtctgctttcttttttcaaaggtaac
ttcctaaaaaaagacaaggacgctaacaaatccaatgagagtgactcagggagagtggaa
ggtaaagatggaagcagaaagacctcactaacagtgccgatgtccaacggagtggcaggt
agcagaactagactggaagagagcaagtccaatggctcacgccatcagagtgaggggctg
gcaaacgggaaggttggaaggactccaactgacatcaggcgctcccaaagctcctcaaat
attaccaccaaaccggagcagaacatgcgcagaacggcatccttgcaccggaacgcagtg
tccacaacgccacggactgcagacaaacagtctcacagcaccctgcagagagaccgttac
agcacaacctcactgggacgcaaaaaaaacgtcccagagtctagtttttga
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