Oryzias latipes (Japanese medaka): 101155925
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Entry
101155925 CDS
T02443
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04115
p53 signaling pathway
ola04120
Ubiquitin mediated proteolysis
ola04137
Mitophagy - animal
ola04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101155925 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
101155925 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
101155925 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
101155925 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ola04121
]
101155925 (siah1)
Enzymes [BR:
ola01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101155925 (siah1)
Ubiquitin system [BR:
ola04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
101155925 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
101155925
NCBI-ProteinID:
XP_004069806
UniProt:
A0A3P9L666
H2MEL0
LinkDB
All DBs
Position
6:complement(25281988..25301682)
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AA seq
286 aa
AA seq
DB search
MDEEMSRQTATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQ
SGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTE
HEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAV
DWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTW
EATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaaatgagtcgccagaccgccaccgcgctgcccactggaacatccaagtgc
cccccctctcagcgcgtgcccaccctgtcgggcaccaccgcctccaacagtgacctggcc
agcctgttcgagtgtcccgtctgcttcgactatgtcctgccccccatcctccagtgccag
tcgggacacctggtgtgctccaactgtcggcccaaactcacctgctgccccacctgcaga
ggcccgctgggctccatcaggaacctggccatggagaaggtggccaactccgtcctcttt
ccctgcaagtacgcctcgtcaggctgcgaggtcacgctcccccacaccgacaagacggag
cacgaggagctgtgcgagttccgaccgtactcctgcccctgtcccggcgcctcctgcaag
tggcagggctccctggacgccgtgatgcctcacctgatgcatcagcacaagtccatcacc
accctgcagggggaggacatcgtgttcctggcgacagacatcaacctgcccggcgccgtg
gactgggtcatgatgcagtcctgctttggcttccacttcatgctggtcctggagaagcag
gaaaagtacgatggacatcagcagtttttcgccatcgtccagctcattgggacccggaag
caggccgagaactttgcataccggctggagctgaacgggcaccggcgccggctgacctgg
gaggccacgccgcgctccatccacgagggcatcgccaccgccatcatgaacagcgactgc
ctggtgttcgacacgtcgatcgcgcagctgtttgcagagaacggaaacctgggcattaac
gtcaccatctccatgtgctaa
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