Oryzias latipes (Japanese medaka): 101155969
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Entry
101155969 CDS
T02443
Symbol
ssr1
Name
(RefSeq) translocon-associated protein subunit alpha isoform X2
KO
K13249
translocon-associated protein subunit alpha
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101155969 (ssr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101155969 (ssr1)
Membrane trafficking [BR:
ola04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
101155969 (ssr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAP_alpha
Nop14
Motif
Other DBs
NCBI-GeneID:
101155969
NCBI-ProteinID:
XP_004080859
UniProt:
H2LDF6
LinkDB
All DBs
Position
20:3399050..3405612
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AA seq
292 aa
AA seq
DB search
MNKFLPNLFLLALLVFPATVLLKGPLVQAQDLTEDEEADAVDEDVVDDVTAEDEDNEAEV
EDDENVELTEEKEEEEEALVGEVKASPNADTTILFVKGEDFPANNIVKFLLGFTNKGPEN
FVVDSLDASFRYPQDYQFYIQNFTALQLGTVVPPGRQATFEYSFIPAEPMGGRPFGLVIN
LNYKDSSGNIFQDAVFNQTVTITEREDGLDGETIFMYVFLSGLGLLVIVGLHQLLESRKR
RRPAQKVETGTSSHNDVDMSWIPAETLNQINKASPRRSPRKRNQKRSAGSDE
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatttctacctaacttgtttttgctagcgttgctagtgttcccagcgactgtg
ctcctgaaaggaccgctggtacaagctcaagatctgactgaggatgaggaggctgacgct
gtggatgaagatgtggtggatgatgtgacggctgaagacgaagacaatgaagctgaggta
gaggacgatgaaaacgtggagctgacggaggaaaaagaagaggaggaagaagctttggtt
ggagaggtgaaggcttctcccaatgctgacaccaccatcctcttcgtcaaaggagaagac
ttccccgccaacaacattgtcaagttcctgctgggctttaccaacaaaggtcctgagaac
ttcgtggttgattctctggacgcttccttccgttacccgcaggattaccagttctacatc
cagaacttcacggctctccagctcggcaccgtggttcctcctggcaggcaggccaccttc
gagtactccttcatccccgcggagcccatgggaggccggccgttcggactggtcatcaac
ctcaactacaaggacagcagcggaaacatcttccaagatgctgtgttcaaccagactgtc
accatcactgagagggaggacgggctggatggagaaacgatcttcatgtacgtcttcctc
tctgggctgggcctgctcgtcatcgttgggcttcaccagctgctggaatccagaaagagg
aggcgtccggcacagaaggtggaaactggaacctccagccacaacgacgtagatatgagc
tggatccccgcagaaactctcaaccagatcaacaaagcgtctcccagaagatctcctcgc
aaaaggaaccagaaacgctcggccggctcggacgaatga
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